| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2916 |
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| Symbol | |
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| ID | 7972192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3065795 |
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| End bp | 3067435 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793501 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002944802 |
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| Protein GI | 239815892 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGA CGCACGAGGT ATTCAACCAG CCCGAGCCGC TGGTGGGCTA CAACCTCTTC
GAAACCAACC GGCCCCTGCG CGATGCGTTG AAGTTCAATG CGCCATCGCT TCAGCTCGCG
CAGCTGAGCG AGCTGGGCGC AACCATCGGC TCGGCCGAGA TGCAGGCGCA TGCGCGGCTC
GCCAACACCC ATCCGCCCGA ACTGCACACG CACGACCGCT TCGGCCGGCG CATCGACGAG
GTGGAGTTCC ACCCGAGCTA TCACGTGCTC ATGGCCGCCG CCGTGGGCGC AGGCCTGCAC
GGCACGCCCT GGACGGGTAC TTCGGCCTCG TCGCACGTGC TGCGGGCGGC CGGCTTCATG
CTCTTCACCG AGCTGGAGCC GTCGATCCTT TGCCCGGTCT CGATGACCTA CGCCGCCACG
CCGGCGCTGC GCAGCAATGC CGTCGTGTAC GCCGACTGGG GCCCGAAGCT CGGCAGCCTC
TGGTACGACC CGGCGCTCGC TTCGTTCAAG GACAAGCCCG GCGTGACCAT GGGCATGGGC
ATGACCGAGA AGCAGGGCGG CTCCGACGTG CGCGCCAACA CCACGCAAGC CGTGCGCGGC
GGCAGCGACG CCTGGGGCGA GCGCTACGCG ATCACCGGCC ACAAGTGGTT CTTCTCGGCG
CCGATGTGCG ATGCCTTCCT GGTGCTCGCG CAGGCGCCGG CCGGCCTGAG CTGCTTCTTC
CTGCCGCGCG TGCTGCCCGA CGGGAGCCGC AATGCCATCC ACATCCAGCG CCTGAAGGAC
AAGCTCGGCA ACAAGGCCAA TGCGAGCTCC GAGGTCGAGT TCCACGGCGC CAGCGCCTGG
CTCGTGGGCG AAGAGGGGCG CGGCATTCCG CAGATCCTCG AGATGGGCAC CATGACCCGG
CTCGACTGCG CGCTGGGCAC CAGCGGCCTG ATGCGGCAGG CGCTCGGCAT CGCGCTCAAC
CATGCGAGCC AGCGCATGGC CTTCGGCAAG CCGCTGATCG GGCAGCCGCT CATGAAGAAC
GTGCTGGCCG ACCTCGCGCT CGAAAGCGAG GCCTCCACCG CGCTGGCCAT TCGCCTCGCG
CGCGCCTTCG ACCAGCAGGC CGACGAGCAC GAGCGCCTGA TGGCGCGCCT GCTCACGCCG
GTCGCCAAGT TCTGGATCTG CAAGCGCGGC AGCCACTTCG CCCAGGAAGC CATGGAGTGC
CTGGGCGGCA ACGGCTATGT GGAAGAGGGC GGCGAAGGCA TCATGGCGCG CATCTACCGC
GAGATGCCGC TCAACTCGAT CTGGGAAGGC GCCGGCAACA TCATGGCGCT CGACCTGCTG
CGCGGCCTGC GCAAGGGCGA TGCCGTGGCC GCATTGGCCA AGGAGCTGGC GCCCGCGCGC
GGCCAGCATG CGGCGCTTGA CCGCCTGGCC GATGCGCTGC CGGCCCGCAT CGAGGCCATG
GCTTCCGAGG CCGAGGCGCG CCGCCTCGCG CAGGACGTGG CCCTGGCGGT GCAGGCGGCA
TTGCTCGCAC AGACCGCGCC GCCGGCCGTC GTGGGCGCCT TCTGCGCATC GCGGCTGGGC
GGCGACTGGG GCAACGCCTT CGGCACGCTG GGCGCGGGCA CCGATTTCGA TTCGATCATC
GAGCGCGCGC AGCCGCGCTG A
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| Protein sequence | METTHEVFNQ PEPLVGYNLF ETNRPLRDAL KFNAPSLQLA QLSELGATIG SAEMQAHARL
ANTHPPELHT HDRFGRRIDE VEFHPSYHVL MAAAVGAGLH GTPWTGTSAS SHVLRAAGFM
LFTELEPSIL CPVSMTYAAT PALRSNAVVY ADWGPKLGSL WYDPALASFK DKPGVTMGMG
MTEKQGGSDV RANTTQAVRG GSDAWGERYA ITGHKWFFSA PMCDAFLVLA QAPAGLSCFF
LPRVLPDGSR NAIHIQRLKD KLGNKANASS EVEFHGASAW LVGEEGRGIP QILEMGTMTR
LDCALGTSGL MRQALGIALN HASQRMAFGK PLIGQPLMKN VLADLALESE ASTALAIRLA
RAFDQQADEH ERLMARLLTP VAKFWICKRG SHFAQEAMEC LGGNGYVEEG GEGIMARIYR
EMPLNSIWEG AGNIMALDLL RGLRKGDAVA ALAKELAPAR GQHAALDRLA DALPARIEAM
ASEAEARRLA QDVALAVQAA LLAQTAPPAV VGAFCASRLG GDWGNAFGTL GAGTDFDSII
ERAQPR
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