| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2913 |
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| Symbol | |
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| ID | 7970802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3062560 |
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| End bp | 3063480 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793498 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002944799 |
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| Protein GI | 239815889 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.268989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGA TTGGCTCACC CGTGCGGCGC CCCCGGCGCC TGCCGCCCCT GCTCTCCCTG
CGGGCCTTCG AAGCGGCGGC CGCGCACCTG AGCTTCCAGC GCGCGGCGCT CGAGCTGTCG
GTGACGCCAT CGGCCATCAG CCACCAGGTG CGCGCGCTCG AAGACACGCT GGGCCGGCCG
CTGTTCCGCC GGCTCACGCG GCAGCTCGCG CTGACACCCG CGGGCGAGCG CCTCTTCGAC
GATCTGCGTG CGGGCTTCGA CGCGCTGGAG GCCGGCGTCG AAAGGCTGCG CCAGCCGTCG
GCCCCGCAGG CCGTCACGCT CACCACCAAC ACCGCCTTCG CGGCCCGCTG GGTGCTGCCG
CGCATGGCGG CCTTTCGCAA GGCCTGCCCC GGCATCGAAC TGCGGCTGCA TGCGAGCGAC
ACGCTGGTGG ACCTGGCGCG CGGCGGCGCC GACATTGCCG TGCGGTCAGG CAGCGGCAAC
TGGCCGGGCC TGGTGTCACG CGAACTGATG CCCGAGCGCT ACGCCCCGCT GTGCAGCCCG
ATGCTGGGCC TGAAGCGCGC GGCCGATCTG CCGAAGCACG AGCTGATCCA TTGCGACTGG
CAGCCCGGCG CAGCGGCGCC CGCGCTGTGG CCGCGGTGGT TCAAGAAAGC CGGCATCGCG
CCGCCGCGCG GCCGGTCGAT GAAGGCCGCT GGCCTGTCGT TCTCGGACGA GACCCACGCC
ATCCTTGCCG CGCTCGCGGG CCACGGCGTG GCGCTGCTGA GCCTCACGCT CGCAGCGGAG
GAGCTGCGCA GCGGCGCGCT GGTGCAGCCC TTCGGCCCGG CGCTCGACAC GGGCAGCTAC
TTTCTCGCGG TGGCCGCCGG GCATGAGGGC GAGCCTGCAG TGCGCACTGT ATGGGAGTGG
ATTGCTTCGC AGGCTGCCTG A
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| Protein sequence | MNEIGSPVRR PRRLPPLLSL RAFEAAAAHL SFQRAALELS VTPSAISHQV RALEDTLGRP
LFRRLTRQLA LTPAGERLFD DLRAGFDALE AGVERLRQPS APQAVTLTTN TAFAARWVLP
RMAAFRKACP GIELRLHASD TLVDLARGGA DIAVRSGSGN WPGLVSRELM PERYAPLCSP
MLGLKRAADL PKHELIHCDW QPGAAAPALW PRWFKKAGIA PPRGRSMKAA GLSFSDETHA
ILAALAGHGV ALLSLTLAAE ELRSGALVQP FGPALDTGSY FLAVAAGHEG EPAVRTVWEW
IASQAA
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