| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2912 |
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| Symbol | |
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| ID | 7970801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3061740 |
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| End bp | 3062459 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793497 |
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| Product | NAD(P)H dehydrogenase (quinone) |
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| Protein accession | YP_002944798 |
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| Protein GI | 239815888 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0784034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAA TGAACCTTCT TCACATCGAC GCCAGTGCCC GTCCGGGCCG CTCCGGCATC
GACGCCCATG GCTCGCACAC GCGCCGGTTG TCTGCGCGTT TTGTCGAGCG CTGGCGCGAG
GCGCGGCCGG ACGATCGCGT CGACTACCTC GACGTGGGCC AGCATCCGCC TGCGCATGTC
GATGCCCGCT GGATCCATGC CGCCTTCACC GTGCCCGCCG AGCGCGAACC CTGGATGGCC
GATGCGCTGG CCGAGAGCGA CCGGCTGGTC GACCAGCTCG TGGCCGCCGA CCTGATCGTG
GTGGGCCTGC CGATGTACAA CTTCAGCGTG CCCGCGCAGT TCAAGGCCTG GATCGACAAC
ATCGTGCGCG TGGGCCGTAC CTTCGGCTTC GACCGTGCGC GCGGCGCGGT GCCGTACTGG
CCGATGCTCG CCGATGCGGG CAAGCGCATG GTGCTGCTCG GCGCGCGCGG CGACCACGGC
TACGACCCGG GCGGGCGCAT CGCGCACCTG AACCATGCCG AGCGCACGGT GCGCTCGGTG
TTCGGCTACA TCGGCATCAC CGAGGTGTTC GAGGCCGCGG TGGAGTGCGA CGAGTTCGGC
GGCGAGCAGC TGGCCGAGTC GCTGCGGCAG GCGGAGCGGA AGGTCGATGG GCTGGTGGAC
CAGCTCGCCG CCGAGCCCCG CTCAGCTCAC ACCGCCACCG GGCTGCGCTC GGCGAACTGA
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| Protein sequence | MNTMNLLHID ASARPGRSGI DAHGSHTRRL SARFVERWRE ARPDDRVDYL DVGQHPPAHV
DARWIHAAFT VPAEREPWMA DALAESDRLV DQLVAADLIV VGLPMYNFSV PAQFKAWIDN
IVRVGRTFGF DRARGAVPYW PMLADAGKRM VLLGARGDHG YDPGGRIAHL NHAERTVRSV
FGYIGITEVF EAAVECDEFG GEQLAESLRQ AERKVDGLVD QLAAEPRSAH TATGLRSAN
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