| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2877 |
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| Symbol | |
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| ID | 7970766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3024683 |
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| End bp | 3025513 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793462 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002944763 |
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| Protein GI | 239815853 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCCA AACTCGCCCG CGGCCTGGCC GCACTGCTGC TCGCCGGCAG CTTCGGCGCC
GTCCAGGCGC AGGAACCGCC CGCGCCCGGC GCGAGCCCGC GCATCGACGC CATCCGCAAG
GCCGGCGAAC TGCGCGTCGG CGTGCTGCAG AACGCGCCTT GGCTGATCGA GAACACCACC
GGCAACGGCG AGCCCTGGAG CGGCCCGGCC TGGCTGCTGG CCAAGGAGTA CGCCCGCCTG
CTCGGCGTCA AGCTCAGCAC GGTGCCGGTG TCGCACGAGA CCAAGGTGCC GGTGCTGGCA
TCGAACCAGG TCGACATGAC GATCAGCCCG CTGGGCGAAA CGCCCGAGCG CTTGAAGGTG
GTCGATTTCG TCGTCTATTC CGCCACCAGC GTGTGCATGT TCGGCCGTGC CGACAACGCC
AAGCTGGCCA AGGCCGCATC AGTGGACGAC CTCAACCGGC CCGAGGTGAC GATCGCCTAC
TTCACCGGCG GCGCCGAGGA AGGCTGGGTC AAGGAACGCT TTCCCAAGGC CAGGCTGCGC
GCCGTGGCCA GCTCCGGCGC CACCGCGCCG GTGGAAGAAA TCATGGCGCG CCGCGCCGAT
GCGGCACCGA TCAACCGCGT GCCGTGGGTC GGGCTGCAGC ACAAGGTCAA GGGCCTCGCG
GTGCTGCCGA AGGAAAACAA CTGCCAGAGC AGCACCGAAA AAGCCTCGCC GGTCGGCCTG
GCCGTCGACA AGAACCAGCC CGCCTACCTC GAATGGCTGC GGCAGGTCGC CAAGGCCCGC
AAGGCGCAGC TCGACGCCGA CGAGGCCCGC GTGATCGGCG CACTGAAATA A
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| Protein sequence | MKPKLARGLA ALLLAGSFGA VQAQEPPAPG ASPRIDAIRK AGELRVGVLQ NAPWLIENTT
GNGEPWSGPA WLLAKEYARL LGVKLSTVPV SHETKVPVLA SNQVDMTISP LGETPERLKV
VDFVVYSATS VCMFGRADNA KLAKAASVDD LNRPEVTIAY FTGGAEEGWV KERFPKARLR
AVASSGATAP VEEIMARRAD AAPINRVPWV GLQHKVKGLA VLPKENNCQS STEKASPVGL
AVDKNQPAYL EWLRQVAKAR KAQLDADEAR VIGALK
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