| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2856 |
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| Symbol | |
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| ID | 7970745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3002056 |
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| End bp | 3002436 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793441 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_002944742 |
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| Protein GI | 239815832 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCAAC CAGCCGCACC CGCACCCGCC GCACCGGCGC CTCAACGGCC GAGCGTGATC
CAGCTCGCCA TCAAGGAAAA GGGCGCGCTC TATGCCGCCT ACATTCCGCT CTTTGCCGAA
GGCGGCATCT TCATTCCGAC CACGCGCGAA TACCGCCTGG GCGACGACGT CTACGTGCTG
CTGACCCTCC CTGAAGACCC GCAGCGCTAC CCGGTGGCCG GCAAGGTCGC TTGGATCACG
CCGCAGCGCG CCGCGGGCAA CCGGGCACCG GGCGTGGGCA TCCGTTTTCC TTCGGACGAG
AAATCGCGCC AGCTCAAGGC CCGCATCGAA GCGGCGCTCG GCGGTTCGAT GGCTTCCGAC
CGCCCCACAC AAACCATTTA G
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| Protein sequence | MNQPAAPAPA APAPQRPSVI QLAIKEKGAL YAAYIPLFAE GGIFIPTTRE YRLGDDVYVL
LTLPEDPQRY PVAGKVAWIT PQRAAGNRAP GVGIRFPSDE KSRQLKARIE AALGGSMASD
RPTQTI
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