| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2745 |
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| Symbol | |
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| ID | 7972346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2893819 |
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| End bp | 2895018 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793332 |
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| Product | protein of unknown function DUF1228 |
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| Protein accession | YP_002944633 |
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| Protein GI | 239815723 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGATA TCGGACGAGA CAGGCGCGGC GCCTGGCGCG CGGCACTGGC GTGCATGGTG
ACCTTGGCCG TTGCCATGGG CCTGGGGCGC TTTGCCTTCA CGCCCATGCT GCCGATCATG
CTGCACGAGG GAAAGCTCCA ACTCGAGGCC GGCGGCGTGC TGGCTTCGCT CAATTACCTT
GGTTACTTTC TGGGCGCGGT CAGTTGCGCG GCCATCGGCA TCCAGGCCAA GCGCATGGTG
CGCGGCGGCC TGGTGGCCAC GGCCGCGCTG CTGGTGGGCA TGGGGGTGCT CCACAGCTTC
ACGAGCTGGG GCATCCTGCG CACCGCGGCC GGCGTGATGA GCGCCTGGGT CTTCGTCTTT
GCGTCCGGCT GGGGCCTGCG GCGGCTCGCC GAGACCCATT CCCCGGCGCT GGCCGGCGTG
ATCTACACCG GCCCCGGCAT CGGCATCGCG ATGACCGGCC TGCTCGGCGG CGCCCTGGGG
CGCTGGGGTT CCGAGGCGGG ATGGATCGGC CTGGGCCTGC TGGCGGTGGT GCTGGTGGTG
CTGATCTGGC GCGTGTTCGA TGATGGCGAA CTGCCCTCGG GGCAAGGCTC CGCGGGCGCG
CCTTCCGCCC AGGCCGGTGC GGCCGCGTCG CCTTCCGCAC GCAGCGACGC CGTCTGGCTG
GTCGCGCTCT ATGGGCTGGC GGGCTTCGGC TACATCATCA CCGCCACCTT CCTGCCGGTG
ATCGCGCGCC AGGCACTGCC GGGCTCGCCG TGGCCCGACT TCTTCTGGCC GCTGTTCGGG
CTGGCGATCA TCCCCGGCGC GCTGATCGGC GCCCGCGCGC CCGTGCACTG GGACAACCGG
TTGCTGCTGG CCGCGGCCTA TGCGCTGCAG GCGCTGGGCG TGGTGCTGTC GGTGGCCTGG
CCCACCATCA CCGGCTTTGC GCTCGGCAGC CTGCTGCTGG GCATGCCTTT CACGGCAATC
ACCCTTTTTG CGATGCGGGA TGCGCGCCGG CTGCGCGGCA ATGCCGCGGC CGGACTGATC
GGCTATGCGA CCGCTTCCTA TGGCGTCGGG CAGATCATCG GCCCGCTGTT TGCGGCGCCG
CTGGCCCAGC GGACCGGGTC TTTCGAGCTC CCGCTGCTGG TGGCGGCCGC CGCATTGGCG
CTCGGATCGG TGCTGTTTGC CGTCGTCTGG TCAAAATCCC GGCGCAAAGT GGCGCTTTGA
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| Protein sequence | MSDIGRDRRG AWRAALACMV TLAVAMGLGR FAFTPMLPIM LHEGKLQLEA GGVLASLNYL
GYFLGAVSCA AIGIQAKRMV RGGLVATAAL LVGMGVLHSF TSWGILRTAA GVMSAWVFVF
ASGWGLRRLA ETHSPALAGV IYTGPGIGIA MTGLLGGALG RWGSEAGWIG LGLLAVVLVV
LIWRVFDDGE LPSGQGSAGA PSAQAGAAAS PSARSDAVWL VALYGLAGFG YIITATFLPV
IARQALPGSP WPDFFWPLFG LAIIPGALIG ARAPVHWDNR LLLAAAYALQ ALGVVLSVAW
PTITGFALGS LLLGMPFTAI TLFAMRDARR LRGNAAAGLI GYATASYGVG QIIGPLFAAP
LAQRTGSFEL PLLVAAAALA LGSVLFAVVW SKSRRKVAL
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