| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2743 |
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| Symbol | |
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| ID | 7972344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2891122 |
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| End bp | 2892168 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793330 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002944631 |
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| Protein GI | 239815721 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTAGAG CCGCCGTTGT CGTTTCCGCG AGCCCGGGCC GCCGCGCCTG GCGTCGCTTC
CGCCGCAATC CGCTGGGGTT CTGGAGCCTG GTCGTCTTCT CGATGCTGGT GGTGCTGAGC
CTGTTCGCCG AGCTGCTGTC CACCGAAAAG CCGCTGGTCG TGCGCTACGC CGGGCAGACC
TACTTCCCGG TGCTGCGCGA CTACTCCGAG AAAACCTTCG GCGGAGACTT CGAAACGCCC
GCCGACTACC TCGATCCCTT CATCCAGAAG CGCATCACCG AGGGCGCCAA CTGGGCGCTC
TATGCACCCA ACCGCTACGG CCCGCGCACG CTGAACTACT TTGCCTCCCA GCCCAATCCC
GCGGCGCCTT CGGGCGAGAA CTTCTTCGGC ACCGACGACC GCGGCCGCGA CCTGCTTGCG
CAGCTGATCT ACGGCTTTCG CGTGAGCGTG CTGTTCGGCC TGGCGCTGAC CGTCATCGGC
ACCGTGCTGG GCGTGGCGGC GGGGGCGGTG CAGGGCTACT TCGCGGGCAA GATCGACCTC
GCGTTCCAGC GCTTCATCGA GATCTGGGCA TCGATGCCCG AGCTCTACCT GCTGATCATC
TTCAGCGCGA TCTTCGCGCC CAGCGTGGCG CTGCTGCTGA TCCTGCTGAG CCTGTTCGGC
TGGATGGGCC TGGCCGACTA CGTGCGCGCC GAATTCCTGC GCAACCGCCA GATGGACTAC
GTGCGCGCCG CTCGGGCGCT GGGCGTGGGC AACCTGCAGA TCATGTGGCG CCACATCCTG
CCCAACAGCA TGGTGCCGGT CGTCACATTC CTGCCGTTTC GCATGAGCGC GGCCATCCTG
GCGCTCACTT CGCTCGATTT CCTGGGCCTG GGCGTGCCGC CGGGCACGCC GTCGCTCGGC
GAACTGCTGA GCCAGGGCAA GGCCAACATC GACGCCTGGT GGATCTCGCT GTCGACCTTC
GGCGTGCTGG TCGTGACGCT GATGCTGCTC ACCTTCATGG GCGACGCGCT GCGCGATGCC
CTCGATCCGC GGAAGGCCGA CAAGTGA
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| Protein sequence | MTRAAVVVSA SPGRRAWRRF RRNPLGFWSL VVFSMLVVLS LFAELLSTEK PLVVRYAGQT
YFPVLRDYSE KTFGGDFETP ADYLDPFIQK RITEGANWAL YAPNRYGPRT LNYFASQPNP
AAPSGENFFG TDDRGRDLLA QLIYGFRVSV LFGLALTVIG TVLGVAAGAV QGYFAGKIDL
AFQRFIEIWA SMPELYLLII FSAIFAPSVA LLLILLSLFG WMGLADYVRA EFLRNRQMDY
VRAARALGVG NLQIMWRHIL PNSMVPVVTF LPFRMSAAIL ALTSLDFLGL GVPPGTPSLG
ELLSQGKANI DAWWISLSTF GVLVVTLMLL TFMGDALRDA LDPRKADK
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