| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2714 |
|---|
| Symbol | |
|---|
| ID | 7972314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 2858420 |
|---|
| End bp | 2858923 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644793300 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002944602 |
|---|
| Protein GI | 239815692 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCCG CCATCGAACT GGCCCGTGGT GACGAAAAGC TGATCGCGGC CATCCACCGC
AGCCGCCGCC TGATCGGCCG CAAGGCGCTG ATGGCCGCGG CCGCCAGCGC CGTGCCCCTG
CCGGGCATCG ACTGGGCGGC CGATGCGGCC CTGCTCTCGC GCCTGGTGCC GCAGATCAGC
GCCGAGTTCG GCCTGTCCGT CACCCAGGTC GAAAAGCTCG CGCCGCACCA GCGCGAACGC
ATCCAGAAGG CCGCCACGAC CGTTGGTGCG CTGCTGGTCG GCCGGCTCGT CACGCGCGAC
CTGCTGATCA AGCTCGCGCG GCACGCGGGC GTGAAGCTCA CGGCCAAGCA GGCCGCCAAG
TACGTGCCGA TTGCCGGGCA GATCGTCTCC GCTGCGCTCG GCTACGCTGC CTTGCGCGCT
CTCGGCGAGC AGCACATCAA GGATTGCGTG CGCGTGAGCG CGACGCTTTC TTTACCGCCT
CCCGGACCGC ACGCGCCCGC CTGA
|
|---|
| Protein sequence | MPSAIELARG DEKLIAAIHR SRRLIGRKAL MAAAASAVPL PGIDWAADAA LLSRLVPQIS
AEFGLSVTQV EKLAPHQRER IQKAATTVGA LLVGRLVTRD LLIKLARHAG VKLTAKQAAK
YVPIAGQIVS AALGYAALRA LGEQHIKDCV RVSATLSLPP PGPHAPA
|
|---|
| |