| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2667 |
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| Symbol | |
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| ID | 7972429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2810899 |
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| End bp | 2811540 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793255 |
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| Product | protein of unknown function DUF1109 |
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| Protein accession | YP_002944558 |
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| Protein GI | 239815648 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4944] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.763895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCG ACGATCTCGT GGCCATGCTG GCGGCCGGCG CCTCGCCCGC GCCGCGCCGC
GCCGCAGGGC GCCGCCTGGC CCTTGCGCTG CTCGCCGGGC TGCCGCTGTC GTTCGCGATC
CTGTTCACCG AATACGGATT GCGCCGCGAC CTGGTGCAAG CCATGTTCTG GCCGATGTTC
TGGGTCAAGG TGCTGTTTCC GCTGTGCATT GCGGCGGCCG CCTTCGTGGT GGTGCAGCGC
CTCGCGCGGC CGGGCGTGCC GGTGCGGCGC GCCTGGATCG GCATCGCGGT GCCGGTGCTT
GCCGTGTGGG TGATGGCGGC GCTGGCCTGG TTCAACGCGC CGGCCGAAGA GCGCATGCCC
TTGCTCATGG GCGAGTCGTG GCGCGTTTGC GCGGTCAGCA TCGGGCTCAT GGCGCTGCCG
GTCTTTGCGG CGGCGCTGCT GGCCCTGAAG GGGCTGGCGC CCACGCGGCC TGCGCTGGCC
GGTGCGGCCG CCGGTGCGCT GGCCGGCGGG GTGGGTGCGG CGGTCTATGC GCTGCACTGC
ATGGAGTTGA CGGCACCTTT CCTCGCGGTC TGGTACGTGA GCGGCATCGG GCTGCCGGTG
CTGGTGGGCG CCGTGCTCGG GCCGCGCCTG CTGCGCTGGT AG
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| Protein sequence | MKTDDLVAML AAGASPAPRR AAGRRLALAL LAGLPLSFAI LFTEYGLRRD LVQAMFWPMF
WVKVLFPLCI AAAAFVVVQR LARPGVPVRR AWIGIAVPVL AVWVMAALAW FNAPAEERMP
LLMGESWRVC AVSIGLMALP VFAAALLALK GLAPTRPALA GAAAGALAGG VGAAVYALHC
MELTAPFLAV WYVSGIGLPV LVGAVLGPRL LRW
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