| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2662 |
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| Symbol | |
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| ID | 7972424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2806360 |
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| End bp | 2807775 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793250 |
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| Product | protein of unknown function DUF1688 |
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| Protein accession | YP_002944553 |
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| Protein GI | 239815643 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0729613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA GCAAGGAAAA CAGCAGCAGC GACCACCTGC CCGCCGACGG CTCGGGCAGC
CTGCCACCGG GCGGCGCGGG CGACATCGAC CCGGCGATCG AGTTCGCGCC CGACACCAGC
CATCCCGCGG GCGCCGCCAC GGTGCTGCGC ACCACCGCCG CCATCCGCGA GCGCGCGGCC
GCGCTGCTGG CGCGCGCGCG CCGGGGCGAG TCGCAGTGGT TCCGCATCGC CGGCAGCGAC
GTGCTCGAAG ACGCGGCGCG CACCGTGGCC GAAGTCACGC GCGAGCGCTA CCCCTGGGAC
ACCATTCCGT ACCACAGCCG CTGGCGCCAC TTCGAGGCCG GCGGCGTCGA CCGGCTGAAG
CAGCTCGATG AACTGCTCGG CAAGGGCGTT GATGCGCGGC AGCGCGCCAG CGCCCACATC
GACCTCGTGC TGGTGAGCGT GCTGCTCGAT GCCGGCGCCG GGCCCGGCTG GCACTACACC
GAGCCCGCCA CCGGCGAGCG CTACACGCGT TCCGAGGGCC TGGCCGTCGC GAGCTTCCAT
GCCTTCACGA GCGGGCTGTT CTCGTCCAAC CCCGACCATC CGCTGCAGGT CGATGCCGCC
GGCCTGCGCG GACTGGTGAC CGACCGGCTC GGCGACGCCT TCCAGGTCAG CGACGTCAAT
CCGCTGGTGG GCCTGGCCGG CCGCGCGGTG CTGCTGCGCC GGCTCGGCGA GGCGATGAGC
GAGCAGCCCG AGACCTTCGG CGACGAGGGC CGGCCCGCCG GCATGTTCGA TGCGCTGGTC
GCCCCGTTCG GCGCGGCCGC GCCGCCCACG GCCGAGATCA CGGCGCACCA GATCCTTTCG
CTGCTGCTCG AGACGCTCTC GCGCATCTGG CCCTCGGCCA ACGCCATCGA CAGCATCGCA
CTCGACGGCA GCGACACCAC GGGCGGCATC GGCTCGAGCG ACCCGGCGCT CGCGCTGGGC
GACTGCTGGC GCCACGGCGC GGTGCGCGGC CCCGGCCTCA CCAACGGCTG GATGCCGTTC
CACAAGCTGT CGCAGTGGCT CACCTATTCA CTGCTCGAAC CCTTCGAGCG GGCCGGCGTG
AAGGTGCGCC ACCTCGACGC GCTCACCGCT TTGCCCGAAT ACCGCAACGG CGGCCTGCTG
ATCGACAGCG GCGTGATCGT GCCGAAGGAC CCGGCCTTTC TTTCGCGCAC CTGGAAGGCC
GGCGACGAGT TCATCGTCGA ATGGCGTGCC CTCACCGTGG CGCTGCTCGA CGAACTGGCG
CCGCGCGTGC GCAAGATCCT CGACCGCACC GACGAAGAGC TGCCGCTGGC CTGCGTGCTC
GAGGGCGGCA CCTGGGCCGC GGGGCGCGTG CTGGCACAGC GCTTGCGAGA CGGATCGCCA
CCGCTCCTGA TCGAAAGCGA CGGCACCGTC TTTTAG
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| Protein sequence | MSNSKENSSS DHLPADGSGS LPPGGAGDID PAIEFAPDTS HPAGAATVLR TTAAIRERAA
ALLARARRGE SQWFRIAGSD VLEDAARTVA EVTRERYPWD TIPYHSRWRH FEAGGVDRLK
QLDELLGKGV DARQRASAHI DLVLVSVLLD AGAGPGWHYT EPATGERYTR SEGLAVASFH
AFTSGLFSSN PDHPLQVDAA GLRGLVTDRL GDAFQVSDVN PLVGLAGRAV LLRRLGEAMS
EQPETFGDEG RPAGMFDALV APFGAAAPPT AEITAHQILS LLLETLSRIW PSANAIDSIA
LDGSDTTGGI GSSDPALALG DCWRHGAVRG PGLTNGWMPF HKLSQWLTYS LLEPFERAGV
KVRHLDALTA LPEYRNGGLL IDSGVIVPKD PAFLSRTWKA GDEFIVEWRA LTVALLDELA
PRVRKILDRT DEELPLACVL EGGTWAAGRV LAQRLRDGSP PLLIESDGTV F
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