| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2653 |
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| Symbol | sbcB |
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| ID | 7972415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2796549 |
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| End bp | 2797988 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793241 |
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| Product | exonuclease I |
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| Protein accession | YP_002944544 |
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| Protein GI | 239815634 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.837858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACA CCTTTCTCTG GCACGACTAC GAAACCTTCG GCGCCGTGCC GCGCCGCGAC
CGGCCATCGC AGTTCGCCGC CATCCGCACC GACGCCGAGC TCAACGAGAT CGGCGAGCCG
CTGATGATCT ATTGCAAGCC GGCGCCCGAC TACCTGCCCA GCCCCGAGGC CTGCCTGATC
ACCGGCATCA CGCCGCAGCT CTGCCTGGAG CGCGGCATTC CCGAGCACGC CTTCGCCGCG
CAGATCGAGA AGGCCTTCTC GCAGCCCGGC ACCATCGGCG TGGGCTACAA CACCATCCGC
TTCGACGACG AGGTCACGCG CTTCCTGTTC TGGCGCAACC TGATCGACCC GTACGCCCGC
GAATGGCAGA ACGACTGCGG CCGCTGGGAC CTGCTGGACG TGGTGCGCCT GACCTACGCG
CTGCGGCCCG ACGGCATCGA GTGGCCGAAG AAGGAAGACG GCAAGCCCAG CTTCAAGCTC
GAGGACCTGG CGCGCGCCAA CGGCCTGCTG CACGAGTCCG CGCACGATGC GCTGTCCGAC
GTGCGCGCCA CCATCGCGCT GGCGCGGCTC ATTCGCGAGC GCCAGCCCAA GCTCTTCGAA
TTCGCCTTCG GCCTGCACAA GAAGGACCGC GTCGCCAGCG AGCTCGGCCT GCCGGCCATG
CGCGAGACGG CGCGGCCTTT CCTGCACGTG TCGGGCATGT TCCCGGTCGA GCGCGGCTGC
CTCGGCGTGA TGTGGCCGCT CGCGAGCCAT CCGACCAACA AGAACGAACT GATCGCCTGG
GACCTGGCCC ACGACCCCAG CGAGCTGCGC GACCTCGACG TCGAGACCCT GCGCCTGCGC
CTGTTCACGC GCACCGCCGA CCTGCCCGAA GGCGTGGTCC GCCTGCCGGT CAAGGGCATC
CACCTCAACA AGTCGCCGAT GGTGGTCGGC AACCTGCGCA CGCTGGCGCC CGCCATGGCC
GAGCGCTGGA ACGTCGACCT TGACGCGGCG CTGCGCCACG CGGCCATCGC GCGCGACCTG
CCCGACATGA GCGCCATCTG GTCGCAGGTG TACGCGCGGC CCAAGGAGGC GGTGCCCGAT
GTCGATGAAG ACCTCTACGG CGGCTTCGTC GGCAACGGCG ACCGGCGCCG CCTGAACCAG
CTGCGCGCGC TGTCGCCCGA GGAGCTCGCC AAGGATCGCA CCGGTTTCGA CGACGGGCGG
CTCGAGGAAA TCCTCTTTCG CTACCGCGCG CGCAACTGGC CCGAGCTGCT CAGCTCGGAA
GAGGCCGAAC GCTGGGAGGC GCTGCGCGCC GCGCGGCTCT TCAAGGGCGA GGGCGGGGCG
CGCACCATCG AGATGCTGTT CAGCGAAGTC GATGCGCTGT CCGAAACCGC GGACGAGCGG
GGCGAAGAGA TCCTGGGCGC ACTCTACGAG TACGCCGAGG CCATCGCGCC CGAAGCCTGA
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| Protein sequence | MNHTFLWHDY ETFGAVPRRD RPSQFAAIRT DAELNEIGEP LMIYCKPAPD YLPSPEACLI
TGITPQLCLE RGIPEHAFAA QIEKAFSQPG TIGVGYNTIR FDDEVTRFLF WRNLIDPYAR
EWQNDCGRWD LLDVVRLTYA LRPDGIEWPK KEDGKPSFKL EDLARANGLL HESAHDALSD
VRATIALARL IRERQPKLFE FAFGLHKKDR VASELGLPAM RETARPFLHV SGMFPVERGC
LGVMWPLASH PTNKNELIAW DLAHDPSELR DLDVETLRLR LFTRTADLPE GVVRLPVKGI
HLNKSPMVVG NLRTLAPAMA ERWNVDLDAA LRHAAIARDL PDMSAIWSQV YARPKEAVPD
VDEDLYGGFV GNGDRRRLNQ LRALSPEELA KDRTGFDDGR LEEILFRYRA RNWPELLSSE
EAERWEALRA ARLFKGEGGA RTIEMLFSEV DALSETADER GEEILGALYE YAEAIAPEA
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