| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2641 |
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| Symbol | lpxK |
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| ID | 7972403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2784740 |
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| End bp | 2785780 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793229 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_002944532 |
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| Protein GI | 239815622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.324237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGTCGC AGGGCCGCAG CACCATCGGC ACGACCGGCC CGATCGCTGT GCCGGCCTCG
CGGCTGCAGC GCGCCTGGCT GCATCGCGGC GCGCTGGCTT GCCTGCTGTG GCCCCTGTCG
CTGCTCTACG CGGCGCTTTT CGGGCTGCGG CGCTGGCTCT ACCGGATGGG ATGGCGCACG
ACCGAACGCG TCCCGGTGCC GGTGATCGTG GTTGGCAACG TGGTTGCCGG CGGCGCGGGC
AAGACGCCGG TCGTGATGGC GGTCGTGCGG CACCTGCAGG CCCGCGGGCT ACAGGTTGGC
GTGGTGTCGC GCGGCTACGG CCGCCGCACC GGCGACTGCC GCGAAGTGCT CGCCGAGAGC
AACGCCCATG ATGTCGGCGA TGAACCGCTG CTGATTCGCC GCGCCACCGG CGTACCGGTG
TTCGTGGCGC GGCGCCGCAT CGAGGCCGCG CGCGCCCTGC TCGCCCGGCA CCCGGCCACG
CAGGTCATCG TGAGCGACGA CGGGCTGCAG CACCTGGCGC TGGCGCGCGA CATCGAGATC
TGCGTGTTCG ACGACCGCGG CGTGGGCAAC GGCTGGCGGC TGCCCGCGGG TCCGCTGCGC
GAGCGCTGGC CGCGCCCGTG CGACCTGGTG CTCCACAGCG GGGAACGTCC CGCCTTCAAG
GGCGGCTACA CCGCCACCCG TTCGCTCGCG CGCGACGCCG TGGCGAGCGA CGGCAGACGC
ACGCCACTCG ACGCTCTCGC CGGCGAACCG CTGATCGCGC TGGCGGCCAT TGCGCGGCCC
GAAGCGTTCT TCGGCATGCT GCGGGCACGC GGGCTGACGC TTGCCGAGAC GATCGCCCTG
CCGGACCACT ACGATTTCGA AGGCTGGCAG CGCCCCGCCG GCACCGGGCA GCGCCTCGTC
TGCACCGAAA AAGATGCCGT CAAGCTGTGG CCCAGGGCCC CCGACGCGCT GGCGGTGCCG
CTGGACTTCG CACCCTCGCC GGAATTCTTC GCGGCGCTCG ACGCAAAGCT ATCATCGCTC
GATGGATACC AAGCTGCTTG A
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| Protein sequence | MPSQGRSTIG TTGPIAVPAS RLQRAWLHRG ALACLLWPLS LLYAALFGLR RWLYRMGWRT
TERVPVPVIV VGNVVAGGAG KTPVVMAVVR HLQARGLQVG VVSRGYGRRT GDCREVLAES
NAHDVGDEPL LIRRATGVPV FVARRRIEAA RALLARHPAT QVIVSDDGLQ HLALARDIEI
CVFDDRGVGN GWRLPAGPLR ERWPRPCDLV LHSGERPAFK GGYTATRSLA RDAVASDGRR
TPLDALAGEP LIALAAIARP EAFFGMLRAR GLTLAETIAL PDHYDFEGWQ RPAGTGQRLV
CTEKDAVKLW PRAPDALAVP LDFAPSPEFF AALDAKLSSL DGYQAA
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