| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2597 |
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| Symbol | |
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| ID | 7972359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2740714 |
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| End bp | 2741967 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793185 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_002944488 |
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| Protein GI | 239815578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG CGATCGTGGG CGCCGGCATC ATCGGCGTCA CAACCGCCTG GGAACTGGTT
TCGGACGGCC ATGAAGTTTC CGTGTTCGAG CGCCGCGGCG CCGCCGCCGA AGAATCCAGT
TTTGCGAATG CGGGGGTGGT CGCGCCGGGC TACGTCACGC CCTGGGCGGC GCCGGGCATG
CGCGCCAAGG TGCTGCGCTC GCTGCTGTCG CCGCACGGCG CCATCAAGCT GCGCTGGCCG
CTCAATTCGC GCGACCTCGG CTGGATGTCG CGCTGGCAGA AGGCCTGCAA GCTCGAAACC
TACCTGGCCA ACCGCGCCCG CATGCAGCGC CTCGCGTTCT ACAGCCGCAC CCGGCTGCAC
GAAGTGACCG AAGCACGCGA ACTGAGCTAC GAACGCAGCG ACGGCTACCT CGTGCTGCTG
CGCTCCAAGC GCGAGAAAAA ACTGGTCCAG CCGGGCCTCG AGGTGCTGCG CGCGACCGGC
AGCGTCTTCA AGGAGGTCGA TGCCGACGAG GCCCGCCGGA TCGAACCCGC GCTCAACACC
GACACGGAGC TCGCAGGCGC CATCCACCTG CCCGAGGACG AAGTGGCCAA CTGCCGCCAG
TTCGCGCTGC TTCTCAAGTG GGAAGCCGAA GCGCTCGGCG CCCAGTTCCA TTTCAATTGC
GACATCGCGC CGATCCACCG CGCGGCGCCC ACCTCCATTT CGCTCGCGAG CGGCTCGCAG
CCGCTGCGCT TCGATGCGGT GGTGGTGTGC GCCGGTCTTG CCTCGGCCAC GCTGCTGCGG
CCGCTCGGCT TGCGGATTCC GCTGGCGCCG GTGTACGGCC ATTCGATCAG CGCGCCAATC
CGCGAATCGC TCAACGCGCC GCGCAGCGCC GTGATGGACG AACGCTACAA GGTTGCGATC
TCGCGCCTGG GCCAGCGCGT GCGCGTGGCC GGCGGCGCCG AGATCGGCGG CTCCCTGAGC
TCCATGAATG CGTCCGCCGT GCAAACGCTC TACAAGGTGC TGCACGACTG GTTTCCGGGC
GCCGCAACGC TGCAGTCGGG CGTGCAGCAA TGGAAGGGCG CGCGCCCGAT GCTGCCCGAC
GGTCCGCCGG TGCTTGGTGC CAGCGGCGTG CCGGGCGTCT GGCTCAATCT GGGCCACGGC
TCGAGCGGAT GGGCGCTGTC GTGCGGCAGC GCACGCGTGG TGGCCGACCT GATCGGCGGC
CGCGACGCGG GCGTCGACCT CGAAGGCCTC GGCGTCGAGC GGCTCGTCCA GTAG
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| Protein sequence | MKIAIVGAGI IGVTTAWELV SDGHEVSVFE RRGAAAEESS FANAGVVAPG YVTPWAAPGM
RAKVLRSLLS PHGAIKLRWP LNSRDLGWMS RWQKACKLET YLANRARMQR LAFYSRTRLH
EVTEARELSY ERSDGYLVLL RSKREKKLVQ PGLEVLRATG SVFKEVDADE ARRIEPALNT
DTELAGAIHL PEDEVANCRQ FALLLKWEAE ALGAQFHFNC DIAPIHRAAP TSISLASGSQ
PLRFDAVVVC AGLASATLLR PLGLRIPLAP VYGHSISAPI RESLNAPRSA VMDERYKVAI
SRLGQRVRVA GGAEIGGSLS SMNASAVQTL YKVLHDWFPG AATLQSGVQQ WKGARPMLPD
GPPVLGASGV PGVWLNLGHG SSGWALSCGS ARVVADLIGG RDAGVDLEGL GVERLVQ
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