| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2584 |
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| Symbol | |
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| ID | 7970061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2726449 |
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| End bp | 2727159 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793171 |
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| Product | protein of unknown function DUF541 |
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| Protein accession | YP_002944476 |
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| Protein GI | 239815566 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3471] Predicted periplasmic/secreted protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0117421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAA TCAGTTTGAT CGCCGCCTTT GCCGCACTGG CTGCGGCTGG CACCGCCGGC
ACCGCCATGG CCCAGAACAT GGTCCCGCCG CCGCAGAACG TGCTGCAGCT CACGGCCTCC
GGCACAGTGG AAGTGCAGCA GGACATGCTC AGCATGACGC TCACCACCAC GCGCGACGCA
GCCGATGCCG CCACGGTCCA GTCGCAGCTC AAGGCCGCGG TGGACGCGGC CCTGGCCGAG
GCCAAGAAAA ACGCCCAGCG CGGCCAGCTC GACGTGCGCA CCGGCAATTT CAGCCTGTCG
CCGCGCTACA CCCGCGAAGG CAAGATCAAC GGCTGGCAGG GCTCCGCCGA AATGGTGCTC
GAGGGCCGCG ACTTCGCGCG CATCACGCAG ACCGCAGGCC GCATCACCAC GCTGAACGTC
GGCAACGTGG GCTTCGCGCT CAGCCGCGAG CAGCGCGCCA AGAGCGAGAC CGAGGCCCAG
ACCATCGCCA TCGAGAACTT CAAGCAGAAG GCCACCGAAC TGGCCAAGGG CTTCGGCTTC
GGCGGCTACA CGCTGCGCGA AGTCTCGGTG AACGCGAACG ACAGCGGCCC GATCCGGCCG
CGCGTCATGG CGGCGGCGGC CAAGTCCTTT GCGGCCGATG CGCCGGTGCC GGTGGAAGCC
GGCAAGGCCA GCGTGGTCGT CAACGTCTCG GGATCGGTGC AGCTCAAATA G
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| Protein sequence | MKKISLIAAF AALAAAGTAG TAMAQNMVPP PQNVLQLTAS GTVEVQQDML SMTLTTTRDA
ADAATVQSQL KAAVDAALAE AKKNAQRGQL DVRTGNFSLS PRYTREGKIN GWQGSAEMVL
EGRDFARITQ TAGRITTLNV GNVGFALSRE QRAKSETEAQ TIAIENFKQK ATELAKGFGF
GGYTLREVSV NANDSGPIRP RVMAAAAKSF AADAPVPVEA GKASVVVNVS GSVQLK
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