| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2531 |
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| Symbol | |
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| ID | 7970008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2672301 |
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| End bp | 2673239 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644793118 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002944423 |
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| Protein GI | 239815513 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATG CCTTGATCGA CCTGCGCGCC TGGCGCCAGT TCGTGGCCGT GGCCGAGGAA
CTGCACTTCG GCCGCGCCGC GCTGCGGCTG CACATGACCC AGCCGCCGGT GACGCAGGCC
ATTGCCCAGC TCGAGAAGAC GCTGGGCGTG GTGCTGTTCG ACCGCACGCG CCGGCGCGTG
GCGCTCACGC CGGCCGGCGA GGCGCTGCTG CCCGACGTGC GCGAACTGCT GGCGCGCGCC
CAGGCGCTGC CGGCGCGGGC CCGTGCGGCG GCGGCGGGGC AGGTGGGGCG CGTGCGCATC
GCCTTTGTCT CGACTGTCGG CTTCGAGCAG CTGCCGGCCT GGGTGCGCGA GTTCCGCGTG
CGCTGCCCGG AGGTGGCGCT CGAGCTGGTC GAAGCCACGG GCGACGTGCA GCTCGAGGCC
TTCGCGCGCG GCGAGATCGA CGCCGGCCTG ATGCTGCATT CGCCGGGCGC CGCGCCGCCC
GGGCTCGCGC GCCTGCCGGT GGAGGAAGAG GCGCTGGTGC TGGCGCTGCC GTCGCAGCAC
CGGCTCGCGC GTGCGCGGCC CGTGCCGCTG GCCGAGGCGC TGGCCGAGCC GCTCGTGATC
TTTCCGCGCC GCATCGTGCC GTCGCTGCAC GATGCGGTCT TCGACCTCTA TCACGCGGCG
GGGCGCACGC CGCAGGTGGC GCAGGAGGCG ATCCAGATGC AGACCATCGT CAACCTCGTC
TCCGGCGGCA TCGGCGTGGC CTGGGTGCCG CACAGCGTGA TGCAGTTCCG GCGCGCCGGG
GTGGTCTATC GGCAGGCCGG CGAGTTCAAG GGCACGGGCC GGCGCCGCGT GGCGCTGCCA
GCCTGCGAAA CCAGCCTCGT GTGGCCCGCG CAGGCCGCGC ATCCGGCGCT CGCGCGCTTC
GTGGAATTCG TGCGCGAGCG CACGGGGCGG GCAACGTAG
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| Protein sequence | MKDALIDLRA WRQFVAVAEE LHFGRAALRL HMTQPPVTQA IAQLEKTLGV VLFDRTRRRV
ALTPAGEALL PDVRELLARA QALPARARAA AAGQVGRVRI AFVSTVGFEQ LPAWVREFRV
RCPEVALELV EATGDVQLEA FARGEIDAGL MLHSPGAAPP GLARLPVEEE ALVLALPSQH
RLARARPVPL AEALAEPLVI FPRRIVPSLH DAVFDLYHAA GRTPQVAQEA IQMQTIVNLV
SGGIGVAWVP HSVMQFRRAG VVYRQAGEFK GTGRRRVALP ACETSLVWPA QAAHPALARF
VEFVRERTGR AT
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