| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2530 |
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| Symbol | |
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| ID | 7970007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2670503 |
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| End bp | 2672197 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793117 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002944422 |
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| Protein GI | 239815512 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCA AGCCAATCCA GATCAACCGC CGCAGCGCCA ACATCGTCGA AGGCAAGAGC
CGCGCGCCCA ACCGCTCGAT GTTCTATGCC ATGGGCTACG AAGAGGCCGA CTTCAAGAAG
CCGATGGTCG GCGTCGCCAA CGGCCACAGC ACCATCACGC CCTGCAACTC GGGCCTGCAG
AAGCTGGCCG ACGCGGCCAT GGCGGGCATC GAGGAAGCCG GCGGCAACGC GCAGGTGTTC
GGCACCCCCA CCATCTCCGA CGGCATGGCC ATGGGCACCG AAGGCATGAA GTACTCGCTG
GTGAGCCGCG AAGTGATCTC CGACTGCATC GAGACCTGCG TGGGCGGCCA GTGGATGGAC
GGCGTGCTGG TGGTCGGCGG CTGCGACAAG AACATGCCGG GCGGCCTCAT GGGCATGCTG
CGCGCCAACG TGCCGGCCAT CTACGTCTAC GGCGGCACCA TCCTGCCGGG CCGCTACAAG
GGACAGGACC TCAACATCGT GAGCGTGTTC GAGGCCGTGG GCCAGAACGC CGCCGGCAAC
ATGAGCGACG AGGACCTGCA CGAGATCGAG AAGCGCGCCA TCCCCGGCAC CGGCTCCTGC
GGCGGCATGT ACACGGCCAA CACCATGTCC AGCGCGTTCG AGGCGCTGGG CATCTCGCTG
CCCTACTCGT CCACCATGGC CAACCCGCAC GACGAGAAGG CCAATTCGGC CAAGGAATCG
GCCAAGGTGC TGATCGAGGC CATCAAGAAA GACATCAAGC CGCGCGACAT CGTCACCAAG
AAGGCCATCG AGAACGCGGT GGCGGTGATC ATGGCCACCG GCGGCTCCAC CAACGCGGTG
CTGCACTTCC TGGCCATTGC GCATGCGGCC GGCGTCGAGT GGTCCATCGA CGACTTCGAG
CGCATGCGCA AGAAGGTGCC GGTGCTGTGC GACCTGAAGC CCTCGGGCAA GTACCTCGCG
GTCGACCTGC ACCAGGCCGG CGGCATCCCG CAGGTCATGA AGGTGCTGCT GAACGCGGGC
CTGCTGCACG GCGACTGCAT CACCATCACC GGCCAGACGA TCGCCGAAGT GCTGAAGGAC
GTGCCCGACG TGCCGCGCGC CGACCAGGAC GTGATCCGCC CGATCGACAA GCCGATGTAC
GAAGAAGGCC ACCTGGCCAT CCTCAAGGGC AACCTCTCGC CCGAAGGCGC GGTCGCCAAG
ATCACCGGCC TCAAGAACCC GGTCATCACC GGCCCGGCGC GCGTGTTCGA CGACGAGCAG
TCGGCGCTCA AGGCCATCCT GGACGGCAAG ATCAAGGCCG GCGACGTGAT GGTGCTGCGC
TACCTCGGCC CCAAGGGCGG CCCGGGCATG CCCGAGATGC TGGCCCCCAC GGGCGCGCTG
ATCGGCGCGG GCCTCGGCGA AAGCGTGGGC CTGATCACCG ATGGCCGCTT CTCGGGCGGC
ACCTGGGGCA TGGTGGTGGG CCACGTCGCG CCTGAAGCAG CCGCGGGCGG CACCATTGCG
TTCGTGAACG AGGGCGACTC GATCACCATC GATGCGCACA AGCTGGTGCT CGAACTCAAT
GTGCCCGAAG CCGAGCTGGC CAAGCGCCGC GAAGGCTGGA AGCCGCCGGC GCCGCGCTAC
ACGCGCGGCG TGCAGGCCAA GTTCGCGTTC AATGCCTCGA GCGCCAGCTC GGGCGCGGTG
CTCGACAAGT TCTGA
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| Protein sequence | MDTKPIQINR RSANIVEGKS RAPNRSMFYA MGYEEADFKK PMVGVANGHS TITPCNSGLQ
KLADAAMAGI EEAGGNAQVF GTPTISDGMA MGTEGMKYSL VSREVISDCI ETCVGGQWMD
GVLVVGGCDK NMPGGLMGML RANVPAIYVY GGTILPGRYK GQDLNIVSVF EAVGQNAAGN
MSDEDLHEIE KRAIPGTGSC GGMYTANTMS SAFEALGISL PYSSTMANPH DEKANSAKES
AKVLIEAIKK DIKPRDIVTK KAIENAVAVI MATGGSTNAV LHFLAIAHAA GVEWSIDDFE
RMRKKVPVLC DLKPSGKYLA VDLHQAGGIP QVMKVLLNAG LLHGDCITIT GQTIAEVLKD
VPDVPRADQD VIRPIDKPMY EEGHLAILKG NLSPEGAVAK ITGLKNPVIT GPARVFDDEQ
SALKAILDGK IKAGDVMVLR YLGPKGGPGM PEMLAPTGAL IGAGLGESVG LITDGRFSGG
TWGMVVGHVA PEAAAGGTIA FVNEGDSITI DAHKLVLELN VPEAELAKRR EGWKPPAPRY
TRGVQAKFAF NASSASSGAV LDKF
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