| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2349 |
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| Symbol | |
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| ID | 7971207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2513267 |
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| End bp | 2515210 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792931 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_002944242 |
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| Protein GI | 239815332 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTCC CATTCCAACG CGTCTATATC GAGAGCGCCG GCTACTTCAT GCCCGGCGAG
CCCATTCCCA ACGAGCGCAT GGATGCCTAC ATCGCACCGC TCAACCGGAT GTCGGAGCGC
ATCAAGCGGC GCATCCTGGC CGAGAACGGC ATCCTCACGC GGCACTATGC GATCGACGAG
GAGGGCATGA CGCGCCACAC CAATGCGCAG CTGGCGGCAT GCGCGATCCG CGACTGCCTG
CAGCGCGGCG GCGCCGAGCT GTCGCGCGTG TCGCTGCTGG CCAGCGGCTC TTCGGGCGGC
GACACGCTGA TGCCCGGCTT TGCCAACATG ATCCAGGGCG AACTGGCGGC GCCGCCCATG
GAGACGCTGT CGGTGCACGG CATCTGCGCT GCGGGCGTGT CGGCTATCCA GTCGGCCGCG
CAGGGCATCG AGCTGGGGGC ACACCGCAGC GCGCTCGCGG TGGCCAGCGA AATGCCCTCG
CGGCTTTTCA AGCGCTCGCG CTTTGCGGCG CGCGGCTACG AAACCGACTT CGATTCGCAC
TTCCTGCGCT GGATGCTTTC CGACGGCGCG GGCGCGCTGC TGCTGTCGGA CGGCGCGCCC
GCGCTGGCCG GCAATCCAGG GCTGCGGCTG CGGCTCAAGT GGGTGCACCA GCGCGCGTTC
TCGGGGGACT ATCCGGTCTG CATGCAGCTG GGCCTGACCG AGGACCGCGC GCGCGGCCAT
CTGGACTTCG GCTCGTGGGC CGAGGCGGAG GCGGCGGGTG CCTTGTCGCT GCGGCAGGAC
ATCCGCCTGC TGCCGCATCT GTTCGACATC GGCATCCATG AATACGCAAC GCTGGTGCAG
GGCGGATGGC TCGATCCGAA GCGGATCGAC CACTTCCTGT GCCACTACTC GTCGGAGAAA
TTCATTCCCG TGGTCGAGGA CCTGATGGCC AAGGCCGACC TCGCCATTCC GCGCGAGCGC
TGGTGGAGCA ACCTGGCCTG GCGCGGCAAC ACGGGGGCCG CGTCGATCCT GATCATGCTG
TCGGAGTTCC TGCACACCAA GGCGTTGAAG CCGGGCGAAC AGATCTTCTG CTACGTACCG
GAATCGGGAC GCTTCATGGC CGCCTACATG CTGCTGGAGG TCGAGGCCGC CGAGGCGCCC
GCCCAGGCGC TGGCCGTTCC GCGCACCACG GCCGACGCGG CCCCGGACGA CGAAGCCGCG
ATCGCTCCGC CGCACGACCC GGCCGCCGCG CCCGAAGGCC TCGGCGCGCT GCTGACCGAA
CTGGCCGGCA TCTGGCACGA CTACCGCTCG CGCGCCTGGC GCACGCCGCT GATCCGCCAG
ATCCGCGAGC GCCGCCTTGC CTTGCCCGAC TACCTGAACT GGATGGAGCA GTGGATCCCG
CAGGTGCGCG AAGGCAGCCG CTGGATGCGC GAAGGCGCCG CTTCGCTGAC CGGCCCGTAC
CAGGCGCTGG CCGCGCTGAT CGACGTGCAC GCGGGCGAGG AGCAGGACGA CTTCAACATT
CTCTTCAGCG ACTACCGCAA GGCCGGCGGC ACCGTCGAGC GGATCGACGA TCTGCGCCGC
AACCCTGGCG GAGAGGCGCT CAATGCCTAC CTGCACGGCC TGGCCGCCAC GCGCAACCCG
ATCGGCCTGC TGGGCGCCAT CTACATCATC GAGGGCACGG GCCAGCGCAT CGTTCCCGCG
CTGCTGCCGC TGATCAAGGC CGGCCTGAAG CTGCTGCCCG ACGCCTTCCG CTTTCTCGAA
TACCACGGCC ACAACGACGA GAACCACCTG AACCGCTGGC TCGCCGCGGT GGAGATGGTG
ATGGCCGTGG AAGGCGGCGA GGGCGCCGAA GGCCGGGGCC GGGCGGCCCG CCAGATCATC
GATACCGCGC GCCACACGGC CGCGCTGTAC CTGATGCAGT TTCAGCACAT TACACAGCGG
ATGCCCCATG AGCCGAACGC CTGA
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| Protein sequence | MPVPFQRVYI ESAGYFMPGE PIPNERMDAY IAPLNRMSER IKRRILAENG ILTRHYAIDE
EGMTRHTNAQ LAACAIRDCL QRGGAELSRV SLLASGSSGG DTLMPGFANM IQGELAAPPM
ETLSVHGICA AGVSAIQSAA QGIELGAHRS ALAVASEMPS RLFKRSRFAA RGYETDFDSH
FLRWMLSDGA GALLLSDGAP ALAGNPGLRL RLKWVHQRAF SGDYPVCMQL GLTEDRARGH
LDFGSWAEAE AAGALSLRQD IRLLPHLFDI GIHEYATLVQ GGWLDPKRID HFLCHYSSEK
FIPVVEDLMA KADLAIPRER WWSNLAWRGN TGAASILIML SEFLHTKALK PGEQIFCYVP
ESGRFMAAYM LLEVEAAEAP AQALAVPRTT ADAAPDDEAA IAPPHDPAAA PEGLGALLTE
LAGIWHDYRS RAWRTPLIRQ IRERRLALPD YLNWMEQWIP QVREGSRWMR EGAASLTGPY
QALAALIDVH AGEEQDDFNI LFSDYRKAGG TVERIDDLRR NPGGEALNAY LHGLAATRNP
IGLLGAIYII EGTGQRIVPA LLPLIKAGLK LLPDAFRFLE YHGHNDENHL NRWLAAVEMV
MAVEGGEGAE GRGRAARQII DTARHTAALY LMQFQHITQR MPHEPNA
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