| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2348 |
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| Symbol | |
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| ID | 7971206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2512307 |
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| End bp | 2513263 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792930 |
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| Product | fatty acid desaturase |
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| Protein accession | YP_002944241 |
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| Protein GI | 239815331 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCC GGCCTGAGGC GCCGCGCCGG CCGGCGCGCC TTCGCCATGG GCGCGACTGG
CAGAGCCTGG CGTACCTGGC GGCGCTCCCG GCGCTGGCGG CATGGCAGTG GATGCACGGC
TTTGCCGTGC TGCTCTATGC GCCGATGCTG TTCCTGACGC TGGGCGTGGG CGTGATCCAC
CACAACCATG TGCATCTGCG CATGTGGCGC GGGCGGCGCA TGAACCGGGT CACCGACTTC
TGGATCACGC TGCTGCAGGG CCATCCAACC TTCGTCTTCT GGCCGGCGCA CGTGGCCAAC
CACCATCGCC ACCGGCACGG GCCGCGGGAC GTGGCGCGCA CCTACCGCTT CGGCGGCGAC
ACCAACCATC TGCGGGGCTA CCTGCTGCAT CCGTTCCAGG CCGTGTGGGT GCTGGTGCCG
GTGTTCTTCG GCTGGCTCGC GCGGCTTCGC AGGCGCCGGC CGGGACCCTG GCGCTACTGC
ATGGCGCAGT ACGCCCTGTG GCTCGGCAGC TGGAGCGCGC TGCTGCTGCT CGACTGGCGC
AAGGCCCTTC TGCTGGTGAT CGTGCCGCAG CTGCACGGGC TGCACTGGCT GCTGGCCACC
AACTATCTGC AGCACGCACA TGCCGACGGA CGCCGGCCCG TGCCGGATGT GGAGGCGCGG
CGCGATACCG CGGGTACCCG CCTGAACTAC GCGCGCAATT TCGAGGGGCT GGTGAACCCT
TTGCTGTTCA ACATCGGCCT GCACACCGCA CATCACGAGA ACCCGCATGT CCACTGGTCC
GAGCTCACGC AGCTGCACCG CACGCGCTAC CGCGCGCAGG TCGATCCTGC GCTCAACGAG
CAGGGACTGG TGCCCTACAT GGTTCGCGTG TTCGTGCTCG GAGCGCTGTG GCCGCGTTTT
CGCAGCCGCC CGCTGATGCC GTCCGTGCCC GTGCCGCCCG AGTCTCCAAC CCACTGA
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| Protein sequence | MARRPEAPRR PARLRHGRDW QSLAYLAALP ALAAWQWMHG FAVLLYAPML FLTLGVGVIH
HNHVHLRMWR GRRMNRVTDF WITLLQGHPT FVFWPAHVAN HHRHRHGPRD VARTYRFGGD
TNHLRGYLLH PFQAVWVLVP VFFGWLARLR RRRPGPWRYC MAQYALWLGS WSALLLLDWR
KALLLVIVPQ LHGLHWLLAT NYLQHAHADG RRPVPDVEAR RDTAGTRLNY ARNFEGLVNP
LLFNIGLHTA HHENPHVHWS ELTQLHRTRY RAQVDPALNE QGLVPYMVRV FVLGALWPRF
RSRPLMPSVP VPPESPTH
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