| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2329 |
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| Symbol | |
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| ID | 7971186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2493692 |
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| End bp | 2494300 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792911 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944222 |
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| Protein GI | 239815312 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAA TGAACGCGCG GGGCCCCTTC ATATCCTCGC GGGTTGGATC CCGCGGGCGC
CGGCGCCTGC TTGCCGCCGG TGCACTGGCG TGGCTGGGTG TGCCTGCGGC CCGCGCAAAC
ACCAGCATCG GACCGGTGCT GCCGGCGGTG TCGGTTCCGG CCCTGCCGCT GCGGCGCCAC
GACGGCGCCA CACCGATGCT CGCGGCGCAG TTGCGAGGCG CCCCAACCGC CGTTCAATTG
ATGTTTACCG GATGCAGCAC GGTCTGCCCG ATCCAGGGGG CCTTGTTCTC GACGCTGCAG
GCGGCATTGC TGTCGGAGCG CTACACGGCG GTGCGCCTGC TGTCGCTGAG CATCGACCCG
CTGGCCGACG ACCCTGTGGC ACTGAGCGCC TGGTTGCGGC GCTTCGGCGC AAGGCCAACG
TGGAGCGCGG CGGCGCCAGC CCCCGAGGCG CTTGAGTCGA TGTTCTCGCT GTTCACGGGA
GGCGCGGCAG CGGGCGACCG CCATACCGGC CAGGTTTATC TGTTCGATCG TCAGGCCCGG
CTGGTCTGGC GAACCAGCGA GTTGCCGCCG GCCGAAGAGG TCATGGCCGG ACTGCGGCAG
ATGGGCTAG
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| Protein sequence | MNPMNARGPF ISSRVGSRGR RRLLAAGALA WLGVPAARAN TSIGPVLPAV SVPALPLRRH
DGATPMLAAQ LRGAPTAVQL MFTGCSTVCP IQGALFSTLQ AALLSERYTA VRLLSLSIDP
LADDPVALSA WLRRFGARPT WSAAAPAPEA LESMFSLFTG GAAAGDRHTG QVYLFDRQAR
LVWRTSELPP AEEVMAGLRQ MG
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