| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2284 |
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| Symbol | |
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| ID | 7971139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2425933 |
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| End bp | 2427201 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792866 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002944179 |
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| Protein GI | 239815269 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.926786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATT TGAACGCGCC TTCCATCCCT GTCGCTTCCT CGTCCCAGGA TGCCCGCCTT
GCGGCGGCAC GCCAGCGCCT GGATCGGCTC GAGGGATTTC TCCTTGAGGA TCCCTCGAAC
GGCGCCTTGT TGATCGATGC GTTCGAGACA GCGCTGTCGT GCGGCGCGTG GGAGCGGGCT
CGTTCTCATC TGCAGCATGG ACAGACGTTG AGTACCGAGC CGCTCGCCTG GCAGCTGCGC
GAAGGCGATT TCTGGCTGGC ACAGCAACGG TATGACGAGG CACTCGGCGT TCTGGAAGCA
CTGCAGACAA CGCCCCACCC GCCTGCAGGG TTCGCCGAGG TGCTGCTCCA CAACCTGGCC
TTCATCGACT TCCGACGTGG TCGCTATGCG GAGTGCATTG CCCGCTTGGC ACCAGGACTC
GAAGCATTGG CCGAGGCTGA GTCCGATGCC CGCCCCATAC TTGCAACCCG CGCTCTGCAA
CAGCTCTGGC TGCGATCCAT GCATCACGAT GGCCAGTTGG ATCGAGCGAT GGTCTGGACG
CGTGCCGCAG AGCAGCGGCA TGCGCTGGAT GCGCAGGCCG CTGGCGTGGC CAGCCTGATC
GCGATCGATG CATCGGACCT CGCTGCAGCG CAGCGATGGT CCAGCGCCAG TCTGTCGAGC
GACTCGCCCG CCGATCACCC TGTCGAGGCG CTGGTGGCGC AGGCGTCGTT GGCGCTGGCC
ACCCGCGATG CCAAGCTCGC GGCCCAACTG GCGGATGCGG CATTGCAACG CCAGCCCGGC
GACGGGCGGG CGTGGTCGAC GCGCGCCTTC GCGGCGCTGC TGGGCGGCGA TCTGGTGCTC
GCCCGTGGCG CTTTCGAGAA AGCGGTGGCG GCCATGGCGA ACCATATCGG GACGTGGCAT
GGCTTGGGAT GGACGCAGAT CCTGCAAGGT GACCTGGCCG GTGCGCGTGC AAGCTTCGAT
GCGGCCCTTG CTCTGGATCG AAATTTTGCA GAGAGCCACG GTGGCCTGGC CGTGGTTCTG
GCCAGGCAGT CGTTGCGGCA GGAAGCCGAA GTGCACGCGG AGCTTGCGCT GCGGCTCGAC
AAGCGCAATC TGTCGGGCCG GTATGCGCAG GCCTTGGTCA GCGGCGAAGT CAAGGATGCG
AACGATCTGC AGCGCTTCGC GCGGCGGCTG TTTGGCGGGA GGGCGGGGCC ACTGGGGGGC
GACATGGCGG ATCTTTTCCA GCCGCCTGCT GAACCGGCCG CCACCTCGCC CGCCGACGGA
GAGGTTTGA
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| Protein sequence | MTDLNAPSIP VASSSQDARL AAARQRLDRL EGFLLEDPSN GALLIDAFET ALSCGAWERA
RSHLQHGQTL STEPLAWQLR EGDFWLAQQR YDEALGVLEA LQTTPHPPAG FAEVLLHNLA
FIDFRRGRYA ECIARLAPGL EALAEAESDA RPILATRALQ QLWLRSMHHD GQLDRAMVWT
RAAEQRHALD AQAAGVASLI AIDASDLAAA QRWSSASLSS DSPADHPVEA LVAQASLALA
TRDAKLAAQL ADAALQRQPG DGRAWSTRAF AALLGGDLVL ARGAFEKAVA AMANHIGTWH
GLGWTQILQG DLAGARASFD AALALDRNFA ESHGGLAVVL ARQSLRQEAE VHAELALRLD
KRNLSGRYAQ ALVSGEVKDA NDLQRFARRL FGGRAGPLGG DMADLFQPPA EPAATSPADG
EV
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