Gene Vapar_2266 details

Gene Information

• Locus tag: Vapar_2266
• ID: 7969980
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2411644
• End bp: 2412249
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644792848
• Product: flagellar L-ring protein
• Protein accession: YP_002944161
• Protein GI: 239815251
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.181453
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCGCA GGCACGTTCA TTTCTCTTGC GCTTTCTTGG CGGTGCTGGT TGCCGGCGCG 
GCATTGCTCT GCACGGCGCC GGCCGTTGCC GAAAGCCTCT TCCAGGAGAA CAGCTTTCGG 
CCGCTGACGG CAGACAACAA GGCGTTCCGG GTAGGCGATT CGCTCACCGT GCAGGTATTC 
GAGAACTCGT CCGCCTCGAC CAGCGCCAAC ACCGGCACGC GGCGCGCCAA CGACATCAAT 
GGCTCGGTCA CGCAGACGGG CAATCGGGTC GTGGGGCAAC TGGGCATCGG CGTGACAGGC 
GAATTCGACG GCGGCGGGCG CACGCAGCGC GCCAACAAGC TGCTGGCGAC GCTGACCGTC 
ACGGTCAAGG AAGTGCTGGC CAACAACGAG CTGCGCGTTG CCGGCGAGCA ATTGCTCACG 
GTCAACGACG AACTGCAAAA GGTCAACCTG GAGGGCCGTG TGCGCCCGCA GGACATTTCC 
GACGGGAACG TGGTGCTCTC CACGCGGCTC GCCGACGCCC GCATCACCTA CGTGGGCGAG 
GGCGATGTGG CCGACCGCGC ACGCCGCAGC GCATGGCGGC GGATCTTCGA CTGGCTGGGA 
CTGTGA 

 

Protein sequence

MMRRHVHFSC AFLAVLVAGA ALLCTAPAVA ESLFQENSFR PLTADNKAFR VGDSLTVQVF 
ENSSASTSAN TGTRRANDIN GSVTQTGNRV VGQLGIGVTG EFDGGGRTQR ANKLLATLTV 
TVKEVLANNE LRVAGEQLLT VNDELQKVNL EGRVRPQDIS DGNVVLSTRL ADARITYVGE 
GDVADRARRS AWRRIFDWLG L