| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2258 |
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| Symbol | |
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| ID | 7969972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2403297 |
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| End bp | 2404388 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644792840 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_002944153 |
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| Protein GI | 239815243 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0796477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCATGC ATGTACGAGC AGATGCAGCC ATCGATTTGA CGCAGGAACA GCGCACCGAG
CTTGAGAGGA TTGCGCGCTC GAGACGCACG CCGCAAGCGC TCGCACAGCG CGTTCGGATT
GTTCTGATGA CGGCCGCCGG AATGGGCCCC GGCGACGTGG GCGGGCAACT TGGTGTATCG
CAACCGACGG TGCGCAAGTG GCGTGCTCGT TATGTCGAGG AAGGACTGCC AGGCTTGCGC
AGCGAACCAC GTCCTGGCCG TCCGAGATCG CTGGACGATC AGCGGGTCGC GGATCTGCTG
AACCAGGCGC TGCAGACGCG CCCGAGCAAG CAGACTCACT GGAGCGTACG TAGCTTCGCG
GCCGAGGCCA ACATCAGCAA GGACATGGCG CATCGCCTGT TCCGAGCGGC GAGCATTGCA
CCGCATCGCT CCCGCAGCTT CAAGCTCTCC AACGATCCGG CCTTCGTCGA GAAGGTGCGC
GACATCACAG GGCTCTACCT GAACCCGCCC GATCATGCGC TGGTGCTGTG CGTGGACGAG
AAGAGCCAGA TCCAGGCGCT GGAGCGTACG CAGCCGGTGC TGCCCATGGG GATGGGCTAC
GTCGAAGGCA TCACTCACGA CTACGTTCGC CATGGCACCA CGACGTTGTT CGCCGCGCTC
GATGTGGCCA ATGGGCAAGT GATCTCGCGC ATTCGCGCAA AGCATCGGCA CCAAGAGTTC
CTGGACTTCC TGCGTCAGAT CGACGAGCAG ACACCGCCTG AGCTGGATCT GCATCTGATC
GTGGACAACT ACGTGACGCA CAAGCACGCC AGGGTCAAGG CATGGCTGGC GCGCAACCCG
CGAGTGCACC TGCACTTCAC GCCCACCTAC AGCTCATGGT TGAACCAGGT TGAACGTTGG
TTCGCGCTGA TCACCGAGCG CGCCATTCGT CGCAACTCGT TCAGCAGTGT GCGCCAGCTC
AAGCAGCAAA TCGAGCTGTT CGTGCAGCGC TACAACGCAG ATGCCTCTCC GTTCCAGTGG
GTTGCAACCG CCGATTCAAT CCTGCAGAAG ATCGAACGGA TTGCGAAACG TATTTCTGCG
ACAGGACACT AG
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| Protein sequence | MTMHVRADAA IDLTQEQRTE LERIARSRRT PQALAQRVRI VLMTAAGMGP GDVGGQLGVS
QPTVRKWRAR YVEEGLPGLR SEPRPGRPRS LDDQRVADLL NQALQTRPSK QTHWSVRSFA
AEANISKDMA HRLFRAASIA PHRSRSFKLS NDPAFVEKVR DITGLYLNPP DHALVLCVDE
KSQIQALERT QPVLPMGMGY VEGITHDYVR HGTTTLFAAL DVANGQVISR IRAKHRHQEF
LDFLRQIDEQ TPPELDLHLI VDNYVTHKHA RVKAWLARNP RVHLHFTPTY SSWLNQVERW
FALITERAIR RNSFSSVRQL KQQIELFVQR YNADASPFQW VATADSILQK IERIAKRISA
TGH
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