Gene Vapar_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2243 
Symbol 
ID7969957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp2388850 
End bp2389401 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content62% 
IMG OID644792830 
Producthypothetical protein 
Protein accessionYP_002944143 
Protein GI239815233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.436912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTACGA GGAAAGCGCT GAGTTGGAGC GACGTCAAGG ACAAGCTTGC CGACTTCGAC 
CGCCCGGGCT TGATCGGCCT GGTGCAGGAC CTCTACGCCG CCAGCAAGGA TAACCAAGCC 
TTCCTGCACG CGCGCTTCGG GCTCGGCGAC GATGTGCTGA AACCGTACAA GGCAACCATT 
GACCGCTGGC TGTGGCCCGA CGTGTTTAAG AACCAGGACA CCTCGGTCAC GAAGGCCAAG 
AGGGCCATCG CAGATTACAA GAAGGCCGTC GACCATCCGG AGAGCCTGGC CGAGCTGATG 
GTGTTCTTCT GCGAGCGGGC GGTGGGCTTC AGCAACGATC TCGGCGTGCA GGACGAAGGC 
TACTTCAACG CCCTGGTGCG GATGTTCGGG CAAGCGTTGA AAGTCATGGA CGCTTTGCCC 
GAAGGACGCA GGTCCGCATT GTTGGCTCGC TTGGACGCTG TCCGACGCCT CGGCCACAAC 
CTGGGATACG GCGTTGGCGA CAACATGGAC GACCTGTTGG CCGAGCGTGG ATTCGATGGC 
GGACCGCGAT GA
 
Protein sequence
MGTRKALSWS DVKDKLADFD RPGLIGLVQD LYAASKDNQA FLHARFGLGD DVLKPYKATI 
DRWLWPDVFK NQDTSVTKAK RAIADYKKAV DHPESLAELM VFFCERAVGF SNDLGVQDEG 
YFNALVRMFG QALKVMDALP EGRRSALLAR LDAVRRLGHN LGYGVGDNMD DLLAERGFDG 
GPR