| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2233 |
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| Symbol | |
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| ID | 7969947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2379852 |
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| End bp | 2381711 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792821 |
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| Product | protein of unknown function DUF839 |
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| Protein accession | YP_002944134 |
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| Protein GI | 239815224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3211] Predicted phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTGG ACCGCCGGAT CTTTCTGCAA TCGGGTGCCG CCGCCGTGGT GGCGCTGCTC
CATTCCCAGG GCGCCAGCGC ACCCGCCGGC CCGGGCCGGC CCATGCTCGG CTTCACCGCG
GTGCCGGCGT CGCTGCGCGA TGCGGTAGTG GTGCCGCCCG AATACGAATG GCAGCTGCTC
TATCCCTGGG GTACGCCCAC CGGCATCGCC GGGCAGCCGA TGCCGGCCTT CGCGCCCGAC
GGCAGCAACA GCGCCGCCGA CCAGGCGCTG CAGGCCGGCA TGCACCACGA CGGCATGCAC
TTCTTTACGC TCGCGTCGCC GGACCGCGGC CTGCTCGTGA TGAACCACGA ATACACCGAC
GAGCAACTGC TCCATGCGGG CGGCGGCAAG GAATGGACCG CCGAGAGGGT GCGCAAGTCG
CTGCATGCGA TGGGCGTCTC GGTCATCGAG ATCCGCCTCA CGCGGGGCGG CTGGCGCCAG
GTGCGGCCCT CGCCCTACGC ACGGCGCGTG CACGGGCAGA CGCCCATGCG CATCGCAGGC
CCCGCCGCGG GCGCGGTGCC GATGCGCACC GCCGCCAATC CGGCCGGCGA CGAAGTGCTC
GGCACCTTCG CCAACTGCGC GATGGGCGTC ACGCCCTGGG GCACCTACCT GACCTGCGAG
GAAAACTTCC ACGGCTACTT CGGCGGCCCG AAGGAAGCAG CGAAGGACGC CACGCCCGCA
CAGCGCCGCT ACGGCACGGT GCCGGGCTCG CAATGGGTGG AGTACTGGCG CTTCGAGGAG
CGCTTCGACA TGAGCCGGCA TCCGAACGAG CCCCACCGCT TCGGCTGGGT GGTGGAAATC
GATCCCTTCG ACCCCGCGGC CAAGCCGGTC AAGCGCACCG CGCTCGGGCG CAAGCGCCAG
GAAAGCGCGA CCTGCACGCT TGCCAAGGAC GGGCGCGTGG TCGTCTACAT GGGCGACGAC
GCCAGGTTCG AATACATCTA CAAGTTCGTG AGCCACGGCA AGGTCTCGAT GGCCGGCGAC
GGCGCCCGCG CCTCCGCCAA CAGCCGCCTG CTCGACGAAG GCACGCTCTA CGCCGCACGC
TTCGATGCCG ACGGCCGCGG CCAGTGGCTC GAGCTCGTGC ACGGCCGCAA CGGCCTCGAC
GCGGACAGCG GCTTTGCCGA CCAGGCCGAG GTGCTGATCC ACGCCAGGCT GGCCGCCGAT
GCGGTGGGCG CCACCAGGAT GGACCGTCCC GAATGGATCG CGGTGCATCC GCAGAGCGGC
GAGGTGTACG TCACGCTCAC CAACAACAGC CAGCGCGGCG AGCCGGGCAA GCCCGCGCCC
GATGCGGCCA ACCCGCGTGC CGGCAATCTC TTCGGCGGCA TCCTGCGCTG GCGCGAGGAC
GGCGGCGACG CCGCCAGCGC GGGCTTCGGC TGGGACCACT TCGCGCTGGC CGGCGATCCC
GCGCAGGCGG GCAGCGGCGC GCACTATCCG TCGGACGATG CCGACGTCTT CGGCAACCCC
GACGGCCTGC ATTTCGACGG CGGCGGCCTG CTCTGGATCC AGACCGACAT GAGCGGCCAG
CTCATCGGCA AGCCGCCCTA TGCCTCGCTC GGCAACAACC AGATGCTGTG CGCCGATCCG
GCCACGGGCC GCATCAAGCG CTTTCTCACG GCACCCAGCG GCAGCGAGGT CACGGGCTGC
GTGGTGACGC CGGACCGGCG CACGCTGTTC GTCAACATCC AGCACCCGGG CGAATCGCGC
GACGACGGCA GCGCCACGCC CAATAGCGCC TGGCCCGATG GCACCGTACC CGGCAGCGCG
CGGCCGCGAT CGGCCACGCT GGCGATCCGC CGGCGCGATG GCGCTATCGT CGGCACCTGA
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| Protein sequence | MPLDRRIFLQ SGAAAVVALL HSQGASAPAG PGRPMLGFTA VPASLRDAVV VPPEYEWQLL
YPWGTPTGIA GQPMPAFAPD GSNSAADQAL QAGMHHDGMH FFTLASPDRG LLVMNHEYTD
EQLLHAGGGK EWTAERVRKS LHAMGVSVIE IRLTRGGWRQ VRPSPYARRV HGQTPMRIAG
PAAGAVPMRT AANPAGDEVL GTFANCAMGV TPWGTYLTCE ENFHGYFGGP KEAAKDATPA
QRRYGTVPGS QWVEYWRFEE RFDMSRHPNE PHRFGWVVEI DPFDPAAKPV KRTALGRKRQ
ESATCTLAKD GRVVVYMGDD ARFEYIYKFV SHGKVSMAGD GARASANSRL LDEGTLYAAR
FDADGRGQWL ELVHGRNGLD ADSGFADQAE VLIHARLAAD AVGATRMDRP EWIAVHPQSG
EVYVTLTNNS QRGEPGKPAP DAANPRAGNL FGGILRWRED GGDAASAGFG WDHFALAGDP
AQAGSGAHYP SDDADVFGNP DGLHFDGGGL LWIQTDMSGQ LIGKPPYASL GNNQMLCADP
ATGRIKRFLT APSGSEVTGC VVTPDRRTLF VNIQHPGESR DDGSATPNSA WPDGTVPGSA
RPRSATLAIR RRDGAIVGT
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