| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2223 |
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| Symbol | |
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| ID | 7969937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2368158 |
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| End bp | 2369666 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792811 |
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| Product | protein of unknown function DUF112 transmembrane |
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| Protein accession | YP_002944124 |
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| Protein GI | 239815214 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCAG CACTCTTGCA GGCTTTCTCG ATGGTCTTCG AGCCCTACAC CATCCTCGTG
ATGGTGCTGG CCTCGCTCTA TGGCCTGTTC GTCGGCGCGG TGCCGGGGCT GTCGGCCACC
ATGGCGGTGG CGCTGCTGGT GCCAGTCACC TTCTTCATGC AGCCGATCCC GGCCATTGCG
GCCATGGTGA CGGCCACCGC CATGGCCATC TTCTCGGGCG ACATCCCGGG CTGCCTGCTG
CGCATTCCGG GCACGCCCGC ATCCGCCGCC TACACCGACG AAGCCTTCGC GATGACGCGC
AAGGGCATGG CCGAGACGGC ATTGGGCGCG GGGCTGGTGT TCTCGGCCGT GGGCGGTCTT
TTCGGTACGG TGGTGCTGAT CGTGGCGGCG CCCGCGCTGG CCGACTTCGC GCTCAACTTC
AGTTCCTTCG AGTACTTCTG GCTCGTGCTG CTGGGCCTGA CATGCGCGGT GTTCATCACC
TCCGACCGGC CGCTCAAGGG CATGATCACG CTGCTGCTCG GCCTGCTGGT GGCCTGTGTG
GGGCTCGGCA ATCCGGCGGG CTTTCCGCGC TTCACCTTCG GCAATGCCGA GATGACCGGC
GGCATCGGCA TGATCCCGAT GATGATCGGC ATGTTCGCCA TCTCGGAGGT GATCCGCTTC
GCGGTCGACA CGCTGCCGCC GGGGGAGGTG GTGGTCGAGA AAGTGGGCAG CGTGCTCTCG
GGCCAGTGGG CGCTGGCCAA GAAGTATCCG GTGCAGATAC TGCGCGGCAG CCTGCTGGGC
ACGGCGGTGG GTGCGCTGCC GGGTGCGGGT GCCGACATTG CGGCATGGAT GTCGTACGCC
ATGAGCAAGA AGTTCTCCAA GGAGCCCGAG AAGTTCGGCA CGGGCCATGT CGAAGGCATT
GTCGAATCGG GTTCGGCCAA CAACAGCGCA CTGGCCGGCG CGTGGATTCC GGCGCTTGTG
TTCGGCATCC CGGGCGACTC GATCACGGCC ATCGTGATCG GCGTGCTCTA CATGAAGAAC
CTCAATCCGG GGCCGACGCT GTTCACCACC AATCCGCAGA ACATCTATGC GGTGTTCATG
CTGTTCATCA TCGCCAACAT CATCATGATT CCGCTGGGCA TCCTGTGCAT CAAGGTGGCC
AAGCGCATCC TGCGGGTGCC GCGCAACGTG CTGATGCCGC TGATCCTGCT GTTCTGCATC
GTGGGCGCGT TCGCCATCAA CAACTCGCTG TTCGACGTGG GCGTGATGCT CGTGGCGGGC
ATGGTGGCCT ACCTGCTCGA GGAGAACGGC TTTCCCATTG CGCCGGCGAT CCTGGGCGTG
GTGCTCGGCG GCATGCTCGA AGAGAACTTC ATCACCTCGA TGATCAAGTC GGACGGCAAC
CTGGCCGGCT TCGTGTCGCG GCCGATTGCC GCATCGCTGG CGGCGGTGGT GCTGCTGGTG
TGGCTCGCGC CCCTGCTGAA AAAGCTGTGG CTGAGGGGGC GGCACACCGC TTCGTCTACT
GCAGCTTGA
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| Protein sequence | MSAALLQAFS MVFEPYTILV MVLASLYGLF VGAVPGLSAT MAVALLVPVT FFMQPIPAIA
AMVTATAMAI FSGDIPGCLL RIPGTPASAA YTDEAFAMTR KGMAETALGA GLVFSAVGGL
FGTVVLIVAA PALADFALNF SSFEYFWLVL LGLTCAVFIT SDRPLKGMIT LLLGLLVACV
GLGNPAGFPR FTFGNAEMTG GIGMIPMMIG MFAISEVIRF AVDTLPPGEV VVEKVGSVLS
GQWALAKKYP VQILRGSLLG TAVGALPGAG ADIAAWMSYA MSKKFSKEPE KFGTGHVEGI
VESGSANNSA LAGAWIPALV FGIPGDSITA IVIGVLYMKN LNPGPTLFTT NPQNIYAVFM
LFIIANIIMI PLGILCIKVA KRILRVPRNV LMPLILLFCI VGAFAINNSL FDVGVMLVAG
MVAYLLEENG FPIAPAILGV VLGGMLEENF ITSMIKSDGN LAGFVSRPIA ASLAAVVLLV
WLAPLLKKLW LRGRHTASST AA
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