Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2186 |
Symbol | |
ID | 7973873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2336983 |
End bp | 2337951 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644792774 |
Product | hypothetical protein |
Protein accession | YP_002944087 |
Protein GI | 239815177 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAC GGGTTTCGGA GTTCGGCACT TCCGCGGCAC TGCCGCTCGA GGAAGGCGAC ATCACGCACA AGACAGCCGG CGACATGCTC CGCGAGGCGC GCGAGGCGCA CGGCCTGCAC ATCGAAATGG TGGCCGCGGC GCTCAAGGTG CCGCCGCAGA AGCTCATTGC GCTCGAGGCG GACGACATCG CTTCGCTGCC CGACCCGGTC TTTGCGCGGG CCCTGGCCAG CAGTGTCTGC CGCGCCCTGC GCATCGATCC CGCTCCGGTG CTCGCAAAGC TGCCGGGGGC GCAGCGCGCA GCGCTCGCAC TGGCCGACCG CACGCTCAAG AGCAACATCG TTTCCGGAAC GCCGCGCTGG AATGGCGGGC GCTCCAGCGG GCTGCCGTCG CGCGCGTTGC TGACGGTGGT GGGGCTGCTG CTGGTCGGCG CGGCCGTGTT GTTCTGGCTG CCCCAGTCGG TGTTCGACCA GGTCGGGGCC TCGGTGTCGC GCTGGACATC GCGTGGCGAT GGCGACACCG CTCCGGTGGC GGAAGCGCCG GTGGCTGCGC CGGCTCCTGG CGGATCGTCC GTCGTGGTCG AGAGCGCGCC GGTGTCGCCG GTGGCACCCC CAACCTCGGC TGCACCCGCG GCGCTGGGCA CGCCCCCCGC GGCAGCCCCG CCGGCGGGCA GCGCGCCCGC TGCGGCGGCG GCTTCGCCTT CTGCTGTTGC TGCGGCACCT GCCGGCAGCC AGCAGCTGGT CTTCGTCGCG CGCGAGGAAT GCTGGATCAC CGTCACCGAA GCCGGCGGCA AGCAGCTGCT GCGCCGCAGC CTGCAGGCCG GCGAAACGGT GGCATTGTCG GGAACGCTGC CGCTGTCGGT GGTGGTGGGG CGCGCTTCGG CGGTCGATGT GCAGGTGCAC GGAAAGCCCT ACGATCTGAA GCCTGTCACG CGCGGCGGCG GCGTGGCGCG TTTCGAGGTG AAACCGTGA
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Protein sequence | MTERVSEFGT SAALPLEEGD ITHKTAGDML REAREAHGLH IEMVAAALKV PPQKLIALEA DDIASLPDPV FARALASSVC RALRIDPAPV LAKLPGAQRA ALALADRTLK SNIVSGTPRW NGGRSSGLPS RALLTVVGLL LVGAAVLFWL PQSVFDQVGA SVSRWTSRGD GDTAPVAEAP VAAPAPGGSS VVVESAPVSP VAPPTSAAPA ALGTPPAAAP PAGSAPAAAA ASPSAVAAAP AGSQQLVFVA REECWITVTE AGGKQLLRRS LQAGETVALS GTLPLSVVVG RASAVDVQVH GKPYDLKPVT RGGGVARFEV KP
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