| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2148 |
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| Symbol | |
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| ID | 7973834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2292964 |
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| End bp | 2293671 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792735 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_002944049 |
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| Protein GI | 239815139 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.356082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGCC AGATCGTCCT CGACACTGAA ACCACCGGCC TGTCCGCGGA GAACGGCGAC
CGCATCATCG AGCTCGGCTG CGTGGAGCTG TTCGCCCGCA AGCTCACCGG CAACGACCTG
CACATCTACT TCAATCCCGA GCGCGAGAGC CACGAGGACG CGCTCAAGGT GCACGGCCTC
ACGACCGACT TCCTGCGCGA CAAGCCGAAG TTCGCCACGC TGGCCAACGA CATCGTCGAG
TACCTGCGCG GCGCGGAGCT GATCATCCAC AACGCGGCCT TCGACGTCGG CTTCCTCAAC
AAGGAACTCG AGCTGGCCGG CCTGCCGCCG CTGCGCAGCT TCGTCGGCGA GGTGACCGAC
ACGCTGGCCA TGGCCAAGCA GGTCTACCCG GGCAAGCGCA ATTCGCTCGA CGCGCTGTGC
GACCGCTTCG GCGTCGACCG CTCGAACCGC ACCTTCCACG GCGCCAAGCT CGACGCGCAG
CTGCTGGCCG ACGTGTACAT CAATCTCACG CGCGGCCAGG ACGCCCTGCT GATCGACGTG
GCCTCGAACG AGCCGGCGCA GGGCACCACG GTGGTGGCCA TCGACCTGAG CCAGTTCGAC
TTGCCGGTGA TCATGGCGGC CGAGCAGGAG CTCGCGGCGC ACGAAGCCGT GTTGTCGCAG
CTCGACAAAT CCAGCAACGG GCGCACGCTG TTTCGGCAAA ACAGCTGA
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| Protein sequence | MSRQIVLDTE TTGLSAENGD RIIELGCVEL FARKLTGNDL HIYFNPERES HEDALKVHGL
TTDFLRDKPK FATLANDIVE YLRGAELIIH NAAFDVGFLN KELELAGLPP LRSFVGEVTD
TLAMAKQVYP GKRNSLDALC DRFGVDRSNR TFHGAKLDAQ LLADVYINLT RGQDALLIDV
ASNEPAQGTT VVAIDLSQFD LPVIMAAEQE LAAHEAVLSQ LDKSSNGRTL FRQNS
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