Gene Vapar_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2133 
Symbol 
ID7973819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2279013 
End bp2279504 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content67% 
IMG OID644792720 
Productlactoylglutathione lyase 
Protein accessionYP_002944034 
Protein GI239815124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCG CCGCCGTACG CCCCTTCAAG GTGCTGGGCA TCCAGCAGAT CGCCATCGGC 
GGCCCCGACA AGCTGCGCCT GCAGAAGCTC TGGGTCGACA TGCTGGGGCT CGAGGTCACG
GGCACCTTCA AGAGCGAGCG CGAGAACGTC GACGAGGACA TCTGCTCGAT GGGCAGCGGG
CCGTTCAAGG TCGAGGTCGA CCTGATGCAG CCGCTCGATC CCGAGAAGAA ACCTGCCGTG
CACGCCACGC CGCTCAACCA CGTGGGCCTG TGGATCGACG ACCTGCCCAG GGCCGTCGAG
TGGCTCACTG CGCAGGGCGT GCGCTTTGCG CCCGGCGGCA TCCGCAAGGG CGCGGCGGGT
TTCGACATCT GCTTTCTGCA TCCGAAGGCG AACGACGAAT TCCCGATTGC GGGCGAGGGC
GTGCTGATCG AGATGGTGCA GGCGCCGCCC GAGGTGGTGA GCGCCTTCAG CGCGCTGGCC
GCTACGCGTT GA
 
Protein sequence
MSTAAVRPFK VLGIQQIAIG GPDKLRLQKL WVDMLGLEVT GTFKSERENV DEDICSMGSG 
PFKVEVDLMQ PLDPEKKPAV HATPLNHVGL WIDDLPRAVE WLTAQGVRFA PGGIRKGAAG
FDICFLHPKA NDEFPIAGEG VLIEMVQAPP EVVSAFSALA ATR