| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2032 |
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| Symbol | |
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| ID | 7972434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2175606 |
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| End bp | 2176949 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792629 |
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| Product | C4-dicarboxylate transporter DctA |
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| Protein accession | YP_002943943 |
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| Protein GI | 239815033 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGACA CAACAATCAC ACCCACCAGA AAGCTCCCGC TCTATCGTTC GCTCTACGTG
CAGGTGATCA CGGCGGTGAT CATCGGCGTG CTGCTCGGCC ACTTCCAGCC GGCGCTGGGC
GAGGCCATGA AGCCGCTGGG CGACGGCTTC ATCAAGCTCA TCAAGATGAT CATCGCGCCG
ATCATCTTCT GCACCGTGGT GGTGGGCATC GCAGGCATGG AGGACATGAA GAAGGTCGGC
AAGACCGGCG GCCTGGCGCT CCTGTACTTC GAGATCGTGA GCTCCATCGC GCTGGTGGTG
GGCCTCGTGC TGGTCAACCT GCTCAAGCCC GGCGCGGGCA TGAACATCGA CCCGTCCACG
CTCGACACCA AGGCGCTCGC GTCCTATACC GGCCCGGGCA AGATGACGGG CACGGTCGAC
TTCCTGCTCA ACGTCATCCC CAGCACGCTG GTCGACGCCT TCGCCAAGGG CGAGATCCTG
CAGGTGCTGC TGATCGCGGT GCTGTTCGGC TTTGCGCTGC ACCGCTTCGG CGGGCGCGGC
ACGCTGGTGT TCGACGTGAT CGAGAAGGGC TCGCACGTGC TCTTCGTGAT CGTGGGCTAC
ATCATGAAGC TGGCGCCCAT CGGCGCCTTC GGCGCGATGG CCTTCACCAT CGGCAAGTAC
GGCCTGGGCA GCCTGTTCTC GCTCGGCAAG CTGATGGGCA CGTTCTACCT GACCTGCCTC
TTGTTCATCT TCGTGGTGCT CGGGCTCATT GCGCGCTTCC ACGGCTTCAG CATCTGGAAG
TTCATCAAGT ACATCAAGGA AGAGCTGCTG ATCGTGCTGG GCACCTCGTC CTCCGAATCG
GTGCTGCCGC GCATGATGGA GAAGATGGAG AACCTGGGCG CCAACAAGAC CTGCGTGGGC
CTGGTGATTC CCACCGGCTA CTCGTTCAAC CTGGACGGCA CCTCCATCTA CCTCACGATG
GCGGCCGTGT TCATTGCGCA GGCCACCAAC ACGCCGATGA CGCTGATGCA GGAGATCACG
CTGCTGGCCG TGCTGCTGCT CACCTCCAAG GGCGCGGCGG GCGTCACGGG CAGCGGCTTC
ATCGTGCTGG CGGCCACGCT GTCGGCCGTG GGCCATGTGC CGGTGGCGGG CCTGGCGCTG
ATCCTGGGCA TCGACCGCTT CATGTCGGAG GCGCGCGCAC TGACCAACCT GATCGGCAAC
GGCGTGGCCA CCATCGTGGT GGCCAAGTGG ACCAACGAGC TCGACACCGA GCGGCTGCAC
GCCGGGCTCA ACAACGAGAG CTGGGTCGAG TCGCAGGAGC CCGAAGTGCT CGAAGGCGCA
CGCATCGCAA AGATGGCCGA TTGA
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| Protein sequence | MADTTITPTR KLPLYRSLYV QVITAVIIGV LLGHFQPALG EAMKPLGDGF IKLIKMIIAP
IIFCTVVVGI AGMEDMKKVG KTGGLALLYF EIVSSIALVV GLVLVNLLKP GAGMNIDPST
LDTKALASYT GPGKMTGTVD FLLNVIPSTL VDAFAKGEIL QVLLIAVLFG FALHRFGGRG
TLVFDVIEKG SHVLFVIVGY IMKLAPIGAF GAMAFTIGKY GLGSLFSLGK LMGTFYLTCL
LFIFVVLGLI ARFHGFSIWK FIKYIKEELL IVLGTSSSES VLPRMMEKME NLGANKTCVG
LVIPTGYSFN LDGTSIYLTM AAVFIAQATN TPMTLMQEIT LLAVLLLTSK GAAGVTGSGF
IVLAATLSAV GHVPVAGLAL ILGIDRFMSE ARALTNLIGN GVATIVVAKW TNELDTERLH
AGLNNESWVE SQEPEVLEGA RIAKMAD
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