| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2030 |
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| Symbol | |
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| ID | 7971128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2173994 |
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| End bp | 2174518 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792627 |
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| Product | CinA domain protein |
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| Protein accession | YP_002943941 |
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| Protein GI | 239815031 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACA CCGCCGGCCT CGAGCCGCTT TCCATCCTCG CCGGCCGTGT CGGCGCCATC
CTGCGCGAGC GGCGCCAGAC GGTGGCGGTG GCCGAATCCT CGGCCGGCGG GCTGGTGTCG
GCCGCCCTGC TCGCCATCCC GGGCGCCTCG GCTTTCTTCC TCGGCGGCGC GGTCGTCTAC
TCGCGCCGGG CCGGAAAAGC GCTCTTGGGA CTGACGGCCG AAGACATGGC CGGCATGCGC
GCGGAAACCG AACCCTATGC CAGCTTCATT GCAGGCAGGA TCCGGGGCAG CCACCGCGCC
ACCTGGGGCA TTGCCGAAAG CGGCGCGGCC GGCCCGTCCG GCAGCCCCTA TGGCGACGCG
CCGGGGCATG TGTGCGTGGC CGTCGCCGGA GAGGCTGCGG CCAGCCGGAC GATCGAAACC
GCCGATGCGG ACCGCGCGTC GAACATGGAC GTCTTTGCGC GGCAACTGCT CCTGCTGTTC
CACCAGACGC TGCTGGCGCA GGATCGCCGA GCGCCAGGCT CCTAG
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| Protein sequence | MPDTAGLEPL SILAGRVGAI LRERRQTVAV AESSAGGLVS AALLAIPGAS AFFLGGAVVY
SRRAGKALLG LTAEDMAGMR AETEPYASFI AGRIRGSHRA TWGIAESGAA GPSGSPYGDA
PGHVCVAVAG EAAASRTIET ADADRASNMD VFARQLLLLF HQTLLAQDRR APGS
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