Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2007 |
Symbol | |
ID | 7969800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2151713 |
End bp | 2152207 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644792605 |
Product | Hemerythrin HHE cation binding domain protein |
Protein accession | YP_002943919 |
Protein GI | 239815009 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAACT CCACCAAGCG CGCAGCACCC GATGCATGCA GCCTTCTCGA TACCGACCAC CGCAACGTCA AGAAGATGTT CAAGGCGTAC GAGGAACTGA CCCATTCGCG CGCCGCCGAC GTGCAGCAGA AGAAGCGCGA ACTCGCCAAC CAGATCTGCA CCGAGCTGAC CGTCCATGCC CAGATCGAGG AAGAGATCTT CTACCCGGCC GTGCGCGAGG CGATCAGCGA AACCGATCTT CTGGACGAAG CCGAGGTCGA GCACACCAGC GCCAAGGAGC TGATCGCGCA GATCGAAGCC GCGACCGAGG TGGACGACAA GTTCGATGCC AAGGTCATCG TGCTCGGCGA ATACATCGAC CACCACGTGA AGGAAGAGCG CAACGAGATC TTCGTCAAGG CACGCGCCGC CAGGGGGCTC GACCTGGTGG CCATGCGCGA GCAGCTCGCC GCGCGCAAGG AAGAGCTCAT GGAAGAGCTC ACCGCCGCCG CCTGA
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Protein sequence | MPNSTKRAAP DACSLLDTDH RNVKKMFKAY EELTHSRAAD VQQKKRELAN QICTELTVHA QIEEEIFYPA VREAISETDL LDEAEVEHTS AKELIAQIEA ATEVDDKFDA KVIVLGEYID HHVKEERNEI FVKARAARGL DLVAMREQLA ARKEELMEEL TAAA
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