Gene Vapar_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2007 
Symbol 
ID7969800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2151713 
End bp2152207 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content63% 
IMG OID644792605 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_002943919 
Protein GI239815009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAACT CCACCAAGCG CGCAGCACCC GATGCATGCA GCCTTCTCGA TACCGACCAC 
CGCAACGTCA AGAAGATGTT CAAGGCGTAC GAGGAACTGA CCCATTCGCG CGCCGCCGAC
GTGCAGCAGA AGAAGCGCGA ACTCGCCAAC CAGATCTGCA CCGAGCTGAC CGTCCATGCC
CAGATCGAGG AAGAGATCTT CTACCCGGCC GTGCGCGAGG CGATCAGCGA AACCGATCTT
CTGGACGAAG CCGAGGTCGA GCACACCAGC GCCAAGGAGC TGATCGCGCA GATCGAAGCC
GCGACCGAGG TGGACGACAA GTTCGATGCC AAGGTCATCG TGCTCGGCGA ATACATCGAC
CACCACGTGA AGGAAGAGCG CAACGAGATC TTCGTCAAGG CACGCGCCGC CAGGGGGCTC
GACCTGGTGG CCATGCGCGA GCAGCTCGCC GCGCGCAAGG AAGAGCTCAT GGAAGAGCTC
ACCGCCGCCG CCTGA
 
Protein sequence
MPNSTKRAAP DACSLLDTDH RNVKKMFKAY EELTHSRAAD VQQKKRELAN QICTELTVHA 
QIEEEIFYPA VREAISETDL LDEAEVEHTS AKELIAQIEA ATEVDDKFDA KVIVLGEYID
HHVKEERNEI FVKARAARGL DLVAMREQLA ARKEELMEEL TAAA