| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2001 |
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| Symbol | |
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| ID | 7969794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2147307 |
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| End bp | 2147780 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792599 |
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| Product | putative signal transduction protein with CBS domains |
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| Protein accession | YP_002943913 |
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| Protein GI | 239815003 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0953206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGCG TATCCGAACT GATGACCCGC GGCGTGCGGA CCCTGTCGCC GTCCGACACG
GTGGCGCTGG CCGCCCAGGC CATGGACGAG CTGGACATCG GCGCCATTCC CGTGTGCGAC
GGCCAGCGGC TGCTGGGCAT GGTGACCGAC CGCGACATCG TGCTTCGCGT GGTCGCGCAG
ACGCGCCCGC TGGACACCGC GCTGTCCGAG GTGATGTCGA AGGACGTCAA GTGGTGCAGC
GAGAACGACA ACGTCGAAAC CGTGATGGAC GAGATGGCCG GCTACCAGGT GCGGCGCATG
CCGGTGGTGG ACCGCGGCCG CAGGCTGGTG GGCATGCTGT CGCTGGGCGA CACCGCCGCC
AAGGGCGACA TCGGCAAGGC CGGCGACACG CTCAACATCA TCTCCCAGCC GGCCGAGCCC
GACCGCTCGG GGCAGTCCGC GGCCAGCGGA CCCACCGGCG GGGGCTCCTC GTAG
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| Protein sequence | MTRVSELMTR GVRTLSPSDT VALAAQAMDE LDIGAIPVCD GQRLLGMVTD RDIVLRVVAQ
TRPLDTALSE VMSKDVKWCS ENDNVETVMD EMAGYQVRRM PVVDRGRRLV GMLSLGDTAA
KGDIGKAGDT LNIISQPAEP DRSGQSAASG PTGGGSS
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