| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1953 |
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| Symbol | |
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| ID | 7969746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2093012 |
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| End bp | 2094007 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792552 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943866 |
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| Protein GI | 239814956 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTGC ATCGCACCCT GCAGCGGCGC CAACTGGTGC TGGGCGGCCT TGGCGCCGCC
GCGCTCGCCA CCGCCACCGG CCGCGCCTTT GCGGCCGACT ACCCGGAACG CCCCATCACC
TTCATCTGCC CGTGGCCCGC CGGCGGCACG GCCGATCGCT CGATGCGCGC CATCTGCCAG
ATCGCCGCGC GCGAGCTCGG CCAGCCCATT GCGCTGGAGA ACCGCGCGGG CGCCTCGGGA
ATGATCGGCA CCAAGGCGCT GGCCTCGGCC CGGCCGGACG GCTACACCAT CGGGCAGATC
CCCATCTCGG TGACGCGCTT CGCGCAGATC GGCACCGTGC AGATCGATCC GCTCAAGGAC
CTGAGCTACC TGGCACGCAC CTCGGGCCAG ACCTTCGGCA TCGCGGTGCC GGCCAGCTCG
CCCTTCAAGT CGCTGCGCGA CATGGTGGCG CAGGCCAAGG CCAAGCCGGG CGTCGTCAGC
TACGCGCATG CGGGCGTGGG CGGCGCCACC CACGTGGGCA TGGAGCAGTT CGCGCAGGCG
GCCGGCGTCA AGTTCAACGC CATTGCCTAC AAGGGCGGCT CGGCCGCGCT GCAGGATGTG
CTGGGCGAAC AGGTCGACAT GCTGGCCGAC AGCAGCTCCT GGGCGCCGCA CGTCGAAAGC
GGCAAGCTGC GCCTGCTCGC CACCTGGGGC GAGGCGCGCA CGCCGCGCTT CAAGGACACG
CCCACGCTCA AGGAGCTGGG CTACGACGTG GTGGTGGAAG CACCCAACGG CATCGGCGCG
CCGCGCGGGC TGCCGCCCGC GGTGGAAAAG AAGCTGCGCG ATGCGTTCCG TGTGGCCGTT
GCCAGCGAGG AATTCAAGAA GGTGGCCGAC AGCATCGATG CGCCGGTCAT GTACCAGGAC
GGCCCCGAGT ACCGCAAGTA CGTCGAAGCC GTCTACCGCC AGGAGACCGA GCTGATCCGC
AAGCTCAATC TCAAGGAACT GATGGAGAAA GGTTGA
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| Protein sequence | MTLHRTLQRR QLVLGGLGAA ALATATGRAF AADYPERPIT FICPWPAGGT ADRSMRAICQ
IAARELGQPI ALENRAGASG MIGTKALASA RPDGYTIGQI PISVTRFAQI GTVQIDPLKD
LSYLARTSGQ TFGIAVPASS PFKSLRDMVA QAKAKPGVVS YAHAGVGGAT HVGMEQFAQA
AGVKFNAIAY KGGSAALQDV LGEQVDMLAD SSSWAPHVES GKLRLLATWG EARTPRFKDT
PTLKELGYDV VVEAPNGIGA PRGLPPAVEK KLRDAFRVAV ASEEFKKVAD SIDAPVMYQD
GPEYRKYVEA VYRQETELIR KLNLKELMEK G
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