| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1913 |
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| Symbol | |
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| ID | 7971092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2045562 |
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| End bp | 2047079 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792513 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002943827 |
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| Protein GI | 239814917 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATC GTTTGAACCG CGTGCATGCC TCGCGCTCCG CCGCCGTGAA GGCCGGCCTC
GACCATCCCG TGATCGACAC GGATGTCCAC GTCAACGACT ACGCGCCCGT ACTCGAGGAT
TACGTGGCGC AGTACGGCGG CAGCAAGCTG GTCGACGCGC TGCGCAAGGC GCTGGGCGGA
CGCTTCGTCA CGCGCAATGG CGGCGGCAAG GACTGGTACC AGCAGACGGC CGAGGAGCGC
CAGTTCCACC GCACGCTGCG CGCGCCCTGG TGGGCCCGCG TGACGCGCAA CACCTACGAC
CTGGCCACCT ACACGCTGCC CGCGCTGCTC TACGAGCGCC TGGGCGAACA GGGCTCGGAC
TATTCGATCC TGTTCCCCAA CGACGTGCTC TCGCCCGCCG CGGCCGGCAG CGAATACCGC
CAGCCGCTGC ATCGCGCGAT CAACCACTTC CACGCCGACC AGTACCGGCC GTATGCCGAC
CGCCTGACGC CGGTGGCGGG CATTCCGCTG CACACGCCGC AGGAAGGCAT CGAAGAGCTG
GAGTTCGCGG TAAAGACGCT CGGCCTGAAG GTCATCAACA TCGCAGGCGG GGTGCGCCGG
CCGATCCGCG CCATTGCCGA GAAGTATCCG GCGAAGGAAC ACCCGGAGAT CGCGAAGCAG
ACCGGGTACA TCGACTTCTA CGGCATCGAC AGCGAGCACG ACTACGACCC CTTCTGGGCC
AAGGTGGTGG AACTGGGCGT GCCCGTCACC ACGCACTACG GCAGCCAGGG TTGGACCGGC
CGGCAGTCGA TCAGCAACTA CATGAACAAC CACATCGGCC ACTTTGCCGA TGGCTCGCAA
GCCTTTGCCA AGGCACTGTT CTTCGGCGGC GTGACGCGGC GCTTTCCCGG CCTGCGCGTG
GGCTTGCTCG AAGGCGGTGC CGACTGGGGC TCGCATGTCT ACACGCACCT GGTGGACCGC
TGGGAAAAGC GCAACAGGAA CGCCGTGCGC AACTACGACC CCGCAGAGGC CGACGTCGAA
CTGCTTGCCT CGCTGTTCGA GCGCTACGGC GGCGACCTGC TCAAGGGCCG CACGATCGAC
AAGTCGACGC TGCTGCGCGA CAGCCTCGGT ATTTCGGCGC TGCCGCACAG CCGAGAGCCG
AACGAATCGG AGATCGACGA TTTCGTGCTT GCCGGCATCG AGAAGGTGGA GGACATCCGC
GACCGCTGGG TGAACAACTT CTATTTCGGC TCCGAGGCCG ACGACCGCAC GGTGGCCGCG
GCGTTCAACA CCAAGGTCAA TCCGCTGGGC ACCAGGATCA ACGCGATCTG GTCGTCCGAC
GTGGGCCACT GGGACGTGCC CGAGTTCACC GAGCCGCTGG CCGAAACCTG GGACCTGGTG
CAGCAAGGCG TGATCTCGGC CGCGGACTTC AAGGCCTTTG TCTTCGAGAA CCCGCACCGC
TTCTACACCG AGGCCAATCC GCGCTTCTTC GAAGGCACCG AGGTCGGGCG CAAGCTCGGC
CTGAAGGGCG CGAAATGA
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| Protein sequence | MNDRLNRVHA SRSAAVKAGL DHPVIDTDVH VNDYAPVLED YVAQYGGSKL VDALRKALGG
RFVTRNGGGK DWYQQTAEER QFHRTLRAPW WARVTRNTYD LATYTLPALL YERLGEQGSD
YSILFPNDVL SPAAAGSEYR QPLHRAINHF HADQYRPYAD RLTPVAGIPL HTPQEGIEEL
EFAVKTLGLK VINIAGGVRR PIRAIAEKYP AKEHPEIAKQ TGYIDFYGID SEHDYDPFWA
KVVELGVPVT THYGSQGWTG RQSISNYMNN HIGHFADGSQ AFAKALFFGG VTRRFPGLRV
GLLEGGADWG SHVYTHLVDR WEKRNRNAVR NYDPAEADVE LLASLFERYG GDLLKGRTID
KSTLLRDSLG ISALPHSREP NESEIDDFVL AGIEKVEDIR DRWVNNFYFG SEADDRTVAA
AFNTKVNPLG TRINAIWSSD VGHWDVPEFT EPLAETWDLV QQGVISAADF KAFVFENPHR
FYTEANPRFF EGTEVGRKLG LKGAK
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