| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1910 |
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| Symbol | |
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| ID | 7971089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2042668 |
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| End bp | 2043480 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792510 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002943824 |
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| Protein GI | 239814914 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.839759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCG TCACGCGGGA AGCCGCCGAA CTGGCTGCCG TGCAGCCGCT GCAGCCCGAG
CAGCGCAGCC GCTGGCGCGG CTTCGTGCTG CCCGTGGCGG CTGTCTTGCT GTGGTGGCTG
CTGTCGTCGC TCGACGTCGT GAACTCGGCG CTGCTGGTCT CGCCGGCCAA GGTGCTCGAT
ACCGCGATCG ACCAGGTGAC GAGCGGACGC CTCTGGCGCG CGCTCAGCGC GAGCCTGGCG
CGCGAAGCGA CAGGCTTTGT GATCGGCACC GCGTCGGGCC TCGTGCTCGG TGCGCTGCTG
GGTTTGTCGC CGCTTTTCAA CCGCATCGCC GGTCCGAGCT TCAACACCTT CAAGCAGATC
TCGCTGTTCG CGTGGATTCC GCTGATCTCG GTGTGGTTCG GCCTTGGCGA CGTTGCCAAG
GTGGTGTTCC TGTCGCTGGC TGCGCTGGTG CCGGTAGTGG TCAACACCTG CGACGGCATC
CGCACCGCGC CGGCCGGCCT GCTCGAGGTG GCGCGCGTCT ATGGCTACAC GCGCTGGCAG
ACCGTCACGC AGGTGGTGCT GCCGGCCGCC CTGCCCTCGA TCTTCACGGG CGTCTACCTG
GCGCTCATCT ATTCCTGGCT TGCGACCATC GGCGCCGAGT ACCTGCTGGT GGCCGGCCGC
GGCATCGGCA ACACGCTGAT CGAGGGCAGC GAGCATTTCC AGATGGACCT GGTCATCTTC
GGCATGTTCG TGATCGGCCT CGTCGGCTGG CTCATGAACG CCTCGGCCCG CGCGCTGGAG
CGCCGGCTGG CGCGCTGGAC CGGGCGCGCA TGA
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| Protein sequence | MNTVTREAAE LAAVQPLQPE QRSRWRGFVL PVAAVLLWWL LSSLDVVNSA LLVSPAKVLD
TAIDQVTSGR LWRALSASLA REATGFVIGT ASGLVLGALL GLSPLFNRIA GPSFNTFKQI
SLFAWIPLIS VWFGLGDVAK VVFLSLAALV PVVVNTCDGI RTAPAGLLEV ARVYGYTRWQ
TVTQVVLPAA LPSIFTGVYL ALIYSWLATI GAEYLLVAGR GIGNTLIEGS EHFQMDLVIF
GMFVIGLVGW LMNASARALE RRLARWTGRA
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