Gene Vapar_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1843 
Symbol 
ID7970860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1975913 
End bp1976491 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content70% 
IMG OID644792444 
Producthypothetical protein 
Protein accessionYP_002943759 
Protein GI239814849 
COG category[S] Function unknown 
COG ID[COG3495] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCA TGAGAGCCTT CTTCCGCCGC GCTTTGCCGG CCTTCCTGCT GGCGCTGGGG 
GCCGCTGCCC TGGCGGGCTG CGGGCCGGCC GCGGGCAGCG GCGCAGCGCC GGCGGGTGCC 
GTGCAGGAAC TCAAGTGGGA AGCGCTCGTT CCCAAGGATT GGGACCCGAC CAAGCGCTAC 
CGCAACCTGA GCCTGGAGTC GCTGCGCGAC AACGACCCGC GCGCGATCCA GATGCTGGAC 
GAGATGCGCG CCGTCTGGGA CAACGCGCCG GTCAACGTGG CGCTCGACGG CACGGCGGCG 
CGCCTGTCGG GTTTTGTCGT TCCGCTGGAC AACACGCAGG GCGGCATCCG CGAGTTCCTG 
CTGGTGCCTT ACTTCGGCGC CTGCATCCAC ACCCCGCCGC CGCCCGCCAA CCAGATCGTG 
CACGTGGTCG CGGCCGATAC CGTGAAGGGC CTGCATGCGA TGGACACGGT GCACGTGAGC 
GGCCTGCTGA AGGCGGCGCG CTATTCCTCC GTGGACATGG GCGTGAGCGG CTACGAGATC 
AAGTCGGCCT CGGTGGAGCC TTTCGTCACG GCGCGCTGA
 
Protein sequence
MDSMRAFFRR ALPAFLLALG AAALAGCGPA AGSGAAPAGA VQELKWEALV PKDWDPTKRY 
RNLSLESLRD NDPRAIQMLD EMRAVWDNAP VNVALDGTAA RLSGFVVPLD NTQGGIREFL 
LVPYFGACIH TPPPPANQIV HVVAADTVKG LHAMDTVHVS GLLKAARYSS VDMGVSGYEI 
KSASVEPFVT AR