| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1839 |
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| Symbol | |
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| ID | 7970856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1971150 |
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| End bp | 1973771 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792440 |
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| Product | ATP-dependent chaperone ClpB |
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| Protein accession | YP_002943755 |
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| Protein GI | 239814845 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACAAG ACAAACTCAC CACCAAATTC CAGGAAGCGC TGAGCGATGC CCAGACGCTC
GCGCTCGGCA ACGACAACGC CTACATCGAA CCGGCCCACC TGCTGGTCGC GATGCTGCGC
CAGGAAGACG GCCCGCGCGC CCTGCTTGAG CGCGCCGGCG TCAACGTGCA GGGGCTCGCG
AACGCTGCCG AGGCGGCCAT CAAGAAGCTG CCGCAGGTGC AGGGCCACGA CATCGTGCAG
GTCGGCCCCG AGCTCGGCAA GCTGCTGCAG GTCACCGAGA AGGAAGCCAT CAAGCGCAAT
GACCAGTTCA TTGCGGGCGA GCTCTTCTTG CTGGCCGTGG CCGACAGCAA GTCCGACATC
GGCCGCATCG CCAAGGAAAA CGGCCTCGGC CGCAAGTCGC TCGAATCCGC CATCGACGCC
GTGCGCGGCG GCCAGGGCGT GAACAGCGCC GATGCCGAAG GCCAGCGCGA AGCCCTCAAG
AAATACTGCC TCGACCTGAC CGAGCGCGCG CGCCTGGGCA AGCTCGATCC GGTGATCGGC
CGTGACGAGG AAATCCGCCG CGCGATCCAG GTGCTGCAGC GCCGCACCAA GAACAACCCC
GTGCTCATCG GCGAGCCCGG CGTGGGCAAG ACCGCCATCG TCGAAGGCCT GGCGCAGCGC
ATCGTCGCGG GCGAGGTGCC CGAGTCGCTC AAGGGCAAGC GCGTGCTGTC GCTCGACATG
GCCGCACTGC TGGCCGGTGC CAAGTTCCGC GGCGAGTTCG AGGAACGCCT GAAGACCGTG
CTCAACGAGC TTGCCAAGGA CGAAGGCCAG ACCATCGTCT TCATCGACGA GCTGCACACC
ATGGTGGGCG CCGGCAAGGC CGAGGGCGCG ATGGACGCGG GCAACATGCT CAAGCCCGCG
CTCGCGCGCG GCGAGCTGCA CTGCGTGGGC GCCACCACGC TCGACGAATA CCGCAAGTAC
ATCGAGAAGG ACGCCGCGCT GGAGCGCCGC TTCCAGAAGA TCATCGTGGG CGAGCCCAGC
GTGGAGGCCA CGATCGCCAT CCTGCGCGGC CTGCAGGAAA AGTACGAAGT GCACCATGGC
GTGCAGATCA CCGACCCGGC CATCGTGGCC GCGGCCGAAC TGAGTGACCG CTACATCACC
GACCGCTTCC TGCCCGACAA GGCCATCGAC CTGATCGACG AGGCCGCGGC CAAGATCAAG
ATCGAGATGG ACTCCAAGCC CGAGGTCATG GACCGGCTCG ACCGCCGCCT GATCCAGCTG
CAGATCGAGC GCGAGGCCGT GCGGCGCGAA AAGGACGAAG CCTCGCAGAA GCGCTTCGGC
CTGATCGAGG ACGAGATCGC GCGCCTGCAG AAGGAGATCG CCGACTACGA CGAGATCTGG
CAGGCCGAGA AGGCGCAGGC CCAGGGCAGC GCGAAGATCC GCGAGGACAT CGACAAGATC
AAGTTCGAGA TCGAGGAGTG GAAGCGCAAG GGCGACTTCA ACAAGCTCGC CGAGCTGCAA
TACGGCCAGC TGCCGGCGCT GGAGAAGCGC CTGCGCGAGG CCGAGGAAAG CGAGGCGAGC
AAGGGCAAGT CCAGCGCGCC GACGCTGCTG CGCACGCAAG TGGGCTCCGA AGAAATCGCC
GAGGTCGTGG CGCGCGCCAC CGGCATTCCG GTCGCCAAGC TGATGCAGGG CGAACGCGAC
AAGCTGCTCG TGATGGAAGA CAAGCTGCAT GAGCGCGTGG TGGGGCAGGA CGAGGCCATC
GGCGCGGTCG CCAATGCGAT CCGCCGCTCG CGCTCGGGCC TCTCCGATCC GAACCGCCCG
ACCGGTTCGT TCCTGTTCCT CGGCCCCACG GGGGTGGGCA AGACCGAGCT GTGCAAGGCA
CTCGCGGGCT TCCTGTTCGA CAGCGAAGAC CACCTGATCC GCATCGACAT GAGCGAGTTC
ATGGAGAAGC ACTCGGTCGC CCGCCTGATC GGCGCGCCGC CGGGCTACGT GGGCTACGAG
GAGGGCGGCT ACCTGACCGA GGCCGTGCGC CGCAAGCCCT ACAGCGTGGT GCTGCTCGAC
GAGGTCGAGA AGGCCCACCA CGACGTCTTC AACGTGCTGC TTCAGGTGCT CGACGATGGC
CGCCTCACGG ACGGCCAGGG CCGTACCGTG GACTTCAAGA ACACCGTGAT CGTGATGACC
AGCAACATCG GCTCGCCGAT CATCCAGTCG ATGGTGGGCC AGCCCGCCGA GGAGATCAAG
GAAGCGGTGT GGGACGAGCT CAAGAACTAC TTCCGACCCG AGTTCCTGAA CCGCATCGAC
GAGACCGTGG TGTTCCATGC GCTCGACGCG AAGAACATCG AGTCGATCGC CGCGATCCAG
CTCAAGGTGC TGCAGGCGCG GCTCGCGAAG ATGGACCTGG GCCTGGAGGT GTCGCCCGCG
GCGCTGGCCG AGATTGCCAA GGTCGGCTTC GACCCGGTGT TCGGCGCGCG GCCACTGAAG
CGCGCGATCC AGCAGCGCAT CGAGAATCCG CTCTCCAAGC TGCTGCTCGA CGGCAGCTTC
GGTCCGAAGG ACACGATCGA AGTGAATACC GACCCGATCC GCACCCCCGG CCAGTTCTCG
TTCACCAAGG CCGGGGAACC ATCGGAGGCG GTTGCGGCCT AA
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| Protein sequence | MRQDKLTTKF QEALSDAQTL ALGNDNAYIE PAHLLVAMLR QEDGPRALLE RAGVNVQGLA
NAAEAAIKKL PQVQGHDIVQ VGPELGKLLQ VTEKEAIKRN DQFIAGELFL LAVADSKSDI
GRIAKENGLG RKSLESAIDA VRGGQGVNSA DAEGQREALK KYCLDLTERA RLGKLDPVIG
RDEEIRRAIQ VLQRRTKNNP VLIGEPGVGK TAIVEGLAQR IVAGEVPESL KGKRVLSLDM
AALLAGAKFR GEFEERLKTV LNELAKDEGQ TIVFIDELHT MVGAGKAEGA MDAGNMLKPA
LARGELHCVG ATTLDEYRKY IEKDAALERR FQKIIVGEPS VEATIAILRG LQEKYEVHHG
VQITDPAIVA AAELSDRYIT DRFLPDKAID LIDEAAAKIK IEMDSKPEVM DRLDRRLIQL
QIEREAVRRE KDEASQKRFG LIEDEIARLQ KEIADYDEIW QAEKAQAQGS AKIREDIDKI
KFEIEEWKRK GDFNKLAELQ YGQLPALEKR LREAEESEAS KGKSSAPTLL RTQVGSEEIA
EVVARATGIP VAKLMQGERD KLLVMEDKLH ERVVGQDEAI GAVANAIRRS RSGLSDPNRP
TGSFLFLGPT GVGKTELCKA LAGFLFDSED HLIRIDMSEF MEKHSVARLI GAPPGYVGYE
EGGYLTEAVR RKPYSVVLLD EVEKAHHDVF NVLLQVLDDG RLTDGQGRTV DFKNTVIVMT
SNIGSPIIQS MVGQPAEEIK EAVWDELKNY FRPEFLNRID ETVVFHALDA KNIESIAAIQ
LKVLQARLAK MDLGLEVSPA ALAEIAKVGF DPVFGARPLK RAIQQRIENP LSKLLLDGSF
GPKDTIEVNT DPIRTPGQFS FTKAGEPSEA VAA
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