Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1826 |
Symbol | |
ID | 7970843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1958544 |
End bp | 1958915 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792427 |
Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_002943742 |
Protein GI | 239814832 |
COG category | [R] General function prediction only |
COG ID | [COG3324] Predicted enzyme related to lactoylglutathione lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.145544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACG CCATCAGCTG GTTCGAGATT CCCGTCACCG ACATCGACCG CGCCCAGGCC TTCTACGAAA CCGTGCTCGG CCGCAAGCTG CGCCGCGAAG ACTTCGGCGA CCAGACGCTC GCCGTGTTCC CCTACGACAA GCCCGCCACC GGCGGCGCCC TGCAGGCCGG CGCGAACGCC AGCGCACGCG CGGGCAGCGG CATCCGCATC TACCTGGACT GCATGCCGAG CATCGATGCC GTGCTGGCGC GCGTCGAGGC GGCGGGCGGC CAGATCGTCG CGCCCAAGTC CGCGCTGCCG CCCGGCATGG GCTTCATCGC CCACCTGCGC GACACCGAAG GCAACGAAGT CGGCCTCCAC GCGCTCGCCT GA
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Protein sequence | MQNAISWFEI PVTDIDRAQA FYETVLGRKL RREDFGDQTL AVFPYDKPAT GGALQAGANA SARAGSGIRI YLDCMPSIDA VLARVEAAGG QIVAPKSALP PGMGFIAHLR DTEGNEVGLH ALA
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