| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1748 |
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| Symbol | |
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| ID | 7974490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1883020 |
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| End bp | 1883892 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792347 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002943664 |
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| Protein GI | 239814754 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.294925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACCA TTCTTTTCGA CGGCATCGCC TACGGCATGC TGCTCTTCGT GCTCGCCGTG
GGGCTGGCCG TGACGCTCGG GCTGATGAAC TTCATCAACC TGGCGCATGG CGCCTTTGCC
ATGGCGGGCG GGTACCTCAC GGTGTTTGCG ATGCAGAAGC TGGGCGTGCC GTTTCTGGCC
TGCCTGCCGC TCGCTTTCAT CGTGGTGGCA CTGGCCGGGG CGCTGCTCGA GCGCACGCTC
TACCGGCCGA TGTACGGCAA GCCGCACCTC GACCAGGTGC TGTTTTCCAT CGGCCTCGCG
TTCATGGCGG TGGCGGCGGT CGACTACTTT GTCGGTTCGT CGCAGCAGAA CATCCAGCTG
CCCGAATGGC TGCGCGGGCG CACCGAAGTC GGCGACGGCG CACTGCTGCT CGGCATGGGG
CACTACCGGC TTTTCATCAT CGCGGTGTGC GCCGTGCTCA CGGTGGTGCT CCAGCTCATC
TTGTCGAAGA CGCGCTTCGG CAGCCGGCTG CGCGCCGCCG TCGACGATCC GCGCGTGGCG
GCAGGGCTGG GCATCAACGT CAACATCGTG TTTCTGCTGA CCTTCGCGGT CGGCTCGGGG
CTCGCGGGGC TGGGCGGCGC GCTGGGCGCC GAGATCCTTG GGCTCGACCC CACCTTTCCG
CTCAAGTACA TGATCTATTT CCTGATCGTG GTGTCCGTCG GCGGCACCTC GTCGATCACC
GGGCCGCTCG CGGCCGCACT GCTGCTCGGC ATTGCCGACG TGGCGGGCAA GTACTTCATT
CCGAAGATGG GTGCGTTCAC CGTCTATCTG CTCATGATCC TGATCCTGAT GTGGCGGCCG
CAGGGCCTGT TCACGCGCAA GGGAGGCCGT TGA
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| Protein sequence | MLTILFDGIA YGMLLFVLAV GLAVTLGLMN FINLAHGAFA MAGGYLTVFA MQKLGVPFLA
CLPLAFIVVA LAGALLERTL YRPMYGKPHL DQVLFSIGLA FMAVAAVDYF VGSSQQNIQL
PEWLRGRTEV GDGALLLGMG HYRLFIIAVC AVLTVVLQLI LSKTRFGSRL RAAVDDPRVA
AGLGINVNIV FLLTFAVGSG LAGLGGALGA EILGLDPTFP LKYMIYFLIV VSVGGTSSIT
GPLAAALLLG IADVAGKYFI PKMGAFTVYL LMILILMWRP QGLFTRKGGR
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