| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1678 |
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| Symbol | |
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| ID | 7974746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1810176 |
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| End bp | 1811492 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792277 |
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| Product | O-acetylhomoserine aminocarboxypropyltransferase |
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| Protein accession | YP_002943594 |
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| Protein GI | 239814684 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
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| TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0986045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGCT ACTCCGACCC CGGCTTCGAC ACCCTGGCGC TGCACGCCGG CGCCGCGCCC
GACCCCGCCA CCGGCGCGCG GGCGGTGCCG ATCCACCTCA CCACCTCCTT CGTCTTCGAG
TCGAGCGACC ATGCGGCGGC GCTCTTCAAC CTGGAGCGCG CGGGCCACGT CTACTCGCGC
ATCAGCAATC CGACCAACGC GGTGCTCGAG CAGCGCGTTT CGGCGCTCGA AGGCGGCATC
GGCGCCATTG CCACCGCCAG CGGCCAGGCC GCGCTGCACC TGTCGATCGC CACGCTCATG
GGCGCGGGCT CCCACATCGT GGCAAGCACC GCGCTCTACG GCGGCTCGCA GAACCTGCTG
CACTACACGA TGCGGCGCTT CGGCATCGAA ACCACCTTCG TGAAGCCCGG CGACCTGGAC
GGCTGGCGCG CCGCGATCCG GCCCGAAACC AAGCTGCTGT TCGGCGAAAC CGTGGGCAAC
CCGGGCCTGG ACGTGCTCGA CATTCCCGCG GTGAGCGACA TCGCGCACGC GGCCGGCGTG
CCGCTGCTGG TCGACTCCAC GCTCACCTCG CCCTATCTCA TCAAGCCCTT CGACTGGGGG
GCCGACCTGG TCTACCACTC GGCCACCAAG TTCCTCTCGG GCCATGGCAC GGTGATTGGC
GGGGTGGTGG TCGACGGCGG CAGCTTCGAC TGGGAAAAAT CGGGCAAATT CGCCGAGCTG
ACCCAGGCCT ATGACGGCTT TCACAACATG GTCTTCAGCG AGGAAAGCAC GGTGGGCGCG
TTCCTGCTGC GCGCCCGGCG CGAAGGGCTG CGCGACTTCG GCGCCTCGAT GAGCCCGCAC
ACGGCCTGGC TGATCCTGCA GGGCATCGAG ACGCTGCCGC TGCGCATGGA GCGGCACATC
GACAACACGC AGAAGGTGGT CGAGTTCCTC GCGAGCCACC CTTTCGTGTC GCGCGTGGGC
CATCCGCTGA TCGAATCGCA CCCGAGCCAT GCGCTGGCGC AGAAGCTGTT GCGCCACGGC
GCACGCGGCG CCGGCGCGGT GTTCAGCTTC GACATCAAGG GCAGCCGCGC GCAGGGCAAG
GCGTTCATCG AGGCGCTGAA GCTCTTCAGC CATCTGGCGA ACGTGGGCGA CTGCCGCAGC
CTGGTGATCC ATCCGGCGAG CACCACGCAC TTCCGCATGA CCGACGAGGC GCTCGCGGGG
GCCGGAATTT CCCAAGGGAC GATCCGGCTT TCGATCGGGC TCGAGGACCC GGCCGATCTG
ATCGACGACC TGAAGCGTGC GCTCAAGGCT GCGGAAAAGG CGGGGGTCTC GGCATGA
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| Protein sequence | MPGYSDPGFD TLALHAGAAP DPATGARAVP IHLTTSFVFE SSDHAAALFN LERAGHVYSR
ISNPTNAVLE QRVSALEGGI GAIATASGQA ALHLSIATLM GAGSHIVAST ALYGGSQNLL
HYTMRRFGIE TTFVKPGDLD GWRAAIRPET KLLFGETVGN PGLDVLDIPA VSDIAHAAGV
PLLVDSTLTS PYLIKPFDWG ADLVYHSATK FLSGHGTVIG GVVVDGGSFD WEKSGKFAEL
TQAYDGFHNM VFSEESTVGA FLLRARREGL RDFGASMSPH TAWLILQGIE TLPLRMERHI
DNTQKVVEFL ASHPFVSRVG HPLIESHPSH ALAQKLLRHG ARGAGAVFSF DIKGSRAQGK
AFIEALKLFS HLANVGDCRS LVIHPASTTH FRMTDEALAG AGISQGTIRL SIGLEDPADL
IDDLKRALKA AEKAGVSA
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