| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1669 |
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| Symbol | |
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| ID | 7974737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1802308 |
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| End bp | 1802715 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792268 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_002943585 |
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| Protein GI | 239814675 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3308] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCA TCACGCCGCA AGCCTCTTCT TCCGTCAGCG CCACCCGCTG GCTCGCCGTG
GGCAGCCTTG CCGGCCTGAT CGTGCTGGGC CTGGCCTGGG AGCTGTGGCT CGCGCCGCTG
CGGCCGGGCG GCTCGCTGCT GGCGCTCAAG GTGCTGCCGC TGGTCATTCC GCTCGCGGGG
CTCTACAAGA ACCGCATGTA CACCTACCGC TGGGTCAGCC TGATGATCTG GCTCTATTTC
ACCGAGGGCG TGGTGCGCGC CTGGAGCGAC ACCAACGGCG TGGGGCAGGT GCTCGCGCTC
ATCGAGGTGC TGCTGTGCCT CATGCTCTTT GCGGCCTGCG CCTGGCACGT GCGGCTGCGC
CTGCGCAATG CCAAGGCGGC CCGCCAACTG GAGACTTCCA CCCCATGA
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| Protein sequence | MTTITPQASS SVSATRWLAV GSLAGLIVLG LAWELWLAPL RPGGSLLALK VLPLVIPLAG
LYKNRMYTYR WVSLMIWLYF TEGVVRAWSD TNGVGQVLAL IEVLLCLMLF AACAWHVRLR
LRNAKAARQL ETSTP
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