| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1664 |
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| Symbol | thyA |
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| ID | 7974732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1798207 |
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| End bp | 1799076 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792263 |
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| Product | thymidylate synthase |
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| Protein accession | YP_002943580 |
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| Protein GI | 239814670 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGCGC CGCCCCGTAA AATTCCCAAC ATGACCTCGC CCGCCCGCCC CGTCCGCTCC
CAGTACGAAG ACTTCATGCG CCATGTGGAC ACGCACGGCG TCCACAAGAG CGACCGCACC
GGCACGGGCA CCAAGAGCGT GTTCGGCCAC CAGATGCGCT TCGACCTGAA CGAAGGCTTT
CCGCTGGTGA CCACCAAGAA GGTGCACCTC AGGTCCATCA TCCAGGAGCT GCTGTGGTTC
CTGACCGGCT CCAGCAACAA CAACTGGCTC AAGGAGCGCG GCGTCACCAT CTGGGACGAG
TGGGCGCGCG AGGACGGCGA CCTGGGCCCG GTGTACGGCG TGCAGTGGCG CAGCTGGCCG
ACGCCGGACG GCGGCCACAT CGACCAGATC TCCGAAGTCA TCAAGACCCT GAAGACCAAC
CCCGATTCGC GCCGCATCAT CGTGAGCGCA TGGAACGTGG CCGAGCTCTC GAAGATGGCG
CTCATGCCCT GCCATGCCTT CTTCCAGTTC TACGTGGCGC CGCCGCAGGC ACCGGGCGAG
CGCGGCAAGC TGAGCTGCCA GCTCTACCAG CGCAGCGCCG ACATCTTCCT GGGCGTGCCC
TTCAACATCG CAAGCTACGC GCTGCTCACG CACATGGTGG CGCAGCAGTG CGATCTCGAC
GTGGGCGACT TCATCTGGAC CGGCGGCGAC TGCCACATCT ACAGCAACCA TGCCGAGCAG
GTGGCGCTGC AGCTGAGCCG CACGCCCTAC CCCTACCCCA CGCTGCACAT CAAGCGCAAG
CCGGCCTCGA TCTTCGACTA CCAGTACGAA GACTTCGAGG TGCTCGACTA CCGGCACCAC
GATCCCATCA AGGCACCGGT GGCGGTGTAG
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| Protein sequence | MLAPPRKIPN MTSPARPVRS QYEDFMRHVD THGVHKSDRT GTGTKSVFGH QMRFDLNEGF
PLVTTKKVHL RSIIQELLWF LTGSSNNNWL KERGVTIWDE WAREDGDLGP VYGVQWRSWP
TPDGGHIDQI SEVIKTLKTN PDSRRIIVSA WNVAELSKMA LMPCHAFFQF YVAPPQAPGE
RGKLSCQLYQ RSADIFLGVP FNIASYALLT HMVAQQCDLD VGDFIWTGGD CHIYSNHAEQ
VALQLSRTPY PYPTLHIKRK PASIFDYQYE DFEVLDYRHH DPIKAPVAV
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