| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1650 |
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| Symbol | |
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| ID | 7974718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1783672 |
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| End bp | 1784391 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792249 |
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| Product | protein of unknown function DUF861 cupin_3 |
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| Protein accession | YP_002943566 |
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| Protein GI | 239814656 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.350548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGG CCCTCGTACT GCACCGCGCC GGCGGCGCAC CCCTTTCCAC CGCCTTCCGC
AGGGCGCCGT TCGGCAACGA CGATCCCTTT GCGCGGCACC GCGAGATCGC GTGGGAAGGA
CCTGGCACGA TGAGCGCGGG CCGCACCAGC TTCATCGGCG AGCTCGAAGT CGCCAGCTAT
CCCCACATCG AAACCATCGT CGTGGTCGAG GGCGAGCTGA CCCTGACGGC AGCCGGCGCG
GCCCCGCTGG TGGTCGGCCC CGAGGCGGGC GCCGTCATCG GATGCGGGAC CTCGCTTCGC
ATCCAGGCCG GATCCCGCGT GCGCTTCGTG TTCTGCGCCG CCGCTTGCGA GAGGCCGACG
AAGCGCGGCG TCTTCCCGCT GCATGCCGAC GCCGACTTCA AGCCCACGGC CACGCTGCCC
GCGGACGTGC TGCTGGGCCC CCAGCCGGAA TGCCGCAGCG ACAAGGTCTT CATCGACGAC
GGCGCGCAGT ACAGCGCCGG CGCGTGGGAC TCGACCCCCT ACCACCGCAT CGTTCGGCCG
CACCGCATGA ACGAGTTCAT GCATCTGCTG GCCGGCAGCG TGCGCTTCGC AGCGCCTGAT
GGCAGCGTGC TTTCCACGGC AAAGGGCGAC GCGCTCTTCG TGCCCCAGGG CGCACCGATC
GGCTGGGAAA GCAGCGATCG CGTGGCAAAG TTCTACGTGT GCCAAAGCGT TGCGGCTTGA
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| Protein sequence | MTVALVLHRA GGAPLSTAFR RAPFGNDDPF ARHREIAWEG PGTMSAGRTS FIGELEVASY
PHIETIVVVE GELTLTAAGA APLVVGPEAG AVIGCGTSLR IQAGSRVRFV FCAAACERPT
KRGVFPLHAD ADFKPTATLP ADVLLGPQPE CRSDKVFIDD GAQYSAGAWD STPYHRIVRP
HRMNEFMHLL AGSVRFAAPD GSVLSTAKGD ALFVPQGAPI GWESSDRVAK FYVCQSVAA
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