| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1630 |
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| Symbol | |
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| ID | 7974698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1762591 |
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| End bp | 1763475 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792230 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_002943547 |
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| Protein GI | 239814637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0756138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGC TCCTCGATTC CTTCTGGCGC GCGGTCGCCT ACTGCATGCT GCCGCGCGTG
ATCGTGCTGT CGCTGCTGCC GCTGGGCCTG ATGGTGCTGC TGGCTGCAGG CTTCGGCTAT
TTCTACTGGG ACGCGACCGT CGCCTGGACC CGCGACGCGC TCGACGCCTG GCCCCTGCTG
TCGAGCTTCT GGGGCTGGAT CGGACGGCTC TTCTCGGGCG ACGTCACGGC CGTGCTGGCG
CCGCTGGTGG TGGTGTTTGC CGCCACGCCG GTGATCGTGG TGGTTTCGCT GCTGATCGTG
GCCGGCCTCA TGGCAGGCCC GCTCACCGCG CTGGTCGCGC ACCGCCGCTT TCCCGCGCTC
GAACGCAAGA AGGGCGCGTC CTTCTTCGGC AGCGTGGCGC GCTCGCTCGG CCTCACGCTG
CTGGCGCTGC TCGCGCTCGT GGTGTCGATG CCGCTCTGGC TCATTCCGCC GCTGGTGCTC
ATCTTGCCGC CGCTGATCTG GGGCTGGCTC ACCTACCGCG TGATGAGCTT CGACGCGCTG
GCCGAGCACG CGAGCCCCGA AGAGCGCGCC GCACTGTTGC GCGCGCACCG GCTGCCGCTG
CTGTGCATCG GCGTGCTGTG CGGCTACCTG GGCGCGGCGC CCAGCATCGT CTGGGCCTCC
GGCCTGCTGT TTGCCGCCGC CTTCTTCGTG CTGGTGCCGC TCGCGATCTG GATCTACACG
CTGGTGTTTG CGTTTTCGGC GCTCTGGTTC GGCCACTACT GCCTCGACGC GCTGGCGCAG
CTTCGCGCCC AACGCGGGGC CGCCGCAGCT TCTTCCGGTC CGCCCGGCGG CGCACCCGCG
GCCGAGACCG ACCAGGCCCT TCTCTCCCAA TGGAAATCCC CATGA
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| Protein sequence | MRLLLDSFWR AVAYCMLPRV IVLSLLPLGL MVLLAAGFGY FYWDATVAWT RDALDAWPLL
SSFWGWIGRL FSGDVTAVLA PLVVVFAATP VIVVVSLLIV AGLMAGPLTA LVAHRRFPAL
ERKKGASFFG SVARSLGLTL LALLALVVSM PLWLIPPLVL ILPPLIWGWL TYRVMSFDAL
AEHASPEERA ALLRAHRLPL LCIGVLCGYL GAAPSIVWAS GLLFAAAFFV LVPLAIWIYT
LVFAFSALWF GHYCLDALAQ LRAQRGAAAA SSGPPGGAPA AETDQALLSQ WKSP
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