| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1629 |
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| Symbol | |
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| ID | 7974697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1761578 |
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| End bp | 1762552 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792229 |
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| Product | fatty acid hydroxylase |
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| Protein accession | YP_002943546 |
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| Protein GI | 239814636 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0812703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGATC GGTTGACGGA CGCTTTTTCC GCGCTGCAGG GCTGGTTCTT CGAGACACTG
GTCCAGCCGC TGGTGTTTGC CGTGGGCCTG GGCGGCTGGA CCGAGGACGC CTTCGACGCC
ACCGGCTGGC TGCTGGTCGG GCTGATCCAG GTCGTGGTGC TGCTCGCGGT CATCGGGCCG
CTGCAGCGCT GGCGCGCCGT CGAGCCGGTC ACCGACCGCC GCGCGATCCG CATCGACGTG
CTCTATACGC TGATCCATCG GCTGGGCCTG TTCCGGCTCG CGATGTTCTT CACGCTCGAG
CCGTTCTTCG ACGAGGGCAT CGGCTTTTTG CGCACTGCGG GCTGGGGCAC CTTCCACCTC
GACGAGGTCT GGCCCGGCGT GACCGATGTG CCGTGGGTGG CCTTTGCGAT CTATCTCGTG
GTGCTCGACT TCGTGGGCTA CTGGATCCAC CGGGGCCAGC ACCAGTTCCG GTGGTGGTGG
GGCCTGCATT CGCTGCACCA TTCGCAGCGC CAGATGACGA TGTGGAGCGA CGACCGCAAC
CACCTGCTCG ACGACATCAT CCACGACACG CTCATCGTCA TCGTCGCGCA GCTCATTGGC
GTGGCGCCGG GGCAGTTCAT TGCGTTCGTG GCGTTCACGC AGCTCAGCGA AAGCCTGCAG
CATGCCAACC TGAGGCTGGC TTTCGGCGCC ATTGGCGAGC GGCTGTGGAT CAGTCCGCGC
TTCCACCGGC TGCACCACAG CATCGGGCTG GGCCACGAAT CGCGCGGCGC CCACACGCTG
GGCGGGTGCA ACTTCGGCGT CCTGCTGCCA TGGTGGGACA TGCTCTTTCG CACCGTGAAC
TTCGAGGAGC GCTACGACCC CACGGGCATC CGCGACCAGG TCGAGCCCGA CGCGGACGGC
CGCGTGCGCG ACTACGGGCG CGGCTTCTGG GCCCAGCAAT GGCTCGGGCT CAAGCGGATG
GCCGGCCGCG GCTGA
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| Protein sequence | MIDRLTDAFS ALQGWFFETL VQPLVFAVGL GGWTEDAFDA TGWLLVGLIQ VVVLLAVIGP
LQRWRAVEPV TDRRAIRIDV LYTLIHRLGL FRLAMFFTLE PFFDEGIGFL RTAGWGTFHL
DEVWPGVTDV PWVAFAIYLV VLDFVGYWIH RGQHQFRWWW GLHSLHHSQR QMTMWSDDRN
HLLDDIIHDT LIVIVAQLIG VAPGQFIAFV AFTQLSESLQ HANLRLAFGA IGERLWISPR
FHRLHHSIGL GHESRGAHTL GGCNFGVLLP WWDMLFRTVN FEERYDPTGI RDQVEPDADG
RVRDYGRGFW AQQWLGLKRM AGRG
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