Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1600 |
Symbol | |
ID | 7974829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1730166 |
End bp | 1730522 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792200 |
Product | monovalent cation/proton antiporter, MnhG/PhaG subunit |
Protein accession | YP_002943517 |
Protein GI | 239814607 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1320] Multisubunit Na+/H+ antiporter, MnhG subunit |
TIGRFAM ID | [TIGR01300] monovalent cation/proton antiporter, MnhG/PhaG subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGATT TCATCGTGGG GCCGCTGCCG CTGTGGGCGG AAATCGTCAC CGCCGTGTTC GCGGTGCTCG GCGCGGCCTT TGCGGCCATC GGCTCCTTCG GCCTCGTGCG GCTGCCCACA TTTTTCCGCC GCATCCATGC GCCGACGCTC GGCGCCACGG TGGGCGTGTG GTGCATGACG ATTGCCACCA TCGTCTATTT CTCGGTGCAG GGCTTCAGCC TCTTCCTGCA CGCCGTGCTG ATCGTCCTGT TCATTGCGCT CACGGCGCCC ATCACCACCA TCTTCCTGAT GCGCGCGGCG CTCTTCCGCG AACGGCAAAA GGGCGGCGAC GTGCCGCCGG CGGCCAAGCC GGGCTGA
|
Protein sequence | MTDFIVGPLP LWAEIVTAVF AVLGAAFAAI GSFGLVRLPT FFRRIHAPTL GATVGVWCMT IATIVYFSVQ GFSLFLHAVL IVLFIALTAP ITTIFLMRAA LFRERQKGGD VPPAAKPG
|
| |