Gene Vapar_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1600 
Symbol 
ID7974829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1730166 
End bp1730522 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content67% 
IMG OID644792200 
Productmonovalent cation/proton antiporter, MnhG/PhaG subunit 
Protein accessionYP_002943517 
Protein GI239814607 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1320] Multisubunit Na+/H+ antiporter, MnhG subunit 
TIGRFAM ID[TIGR01300] monovalent cation/proton antiporter, MnhG/PhaG subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATT TCATCGTGGG GCCGCTGCCG CTGTGGGCGG AAATCGTCAC CGCCGTGTTC 
GCGGTGCTCG GCGCGGCCTT TGCGGCCATC GGCTCCTTCG GCCTCGTGCG GCTGCCCACA
TTTTTCCGCC GCATCCATGC GCCGACGCTC GGCGCCACGG TGGGCGTGTG GTGCATGACG
ATTGCCACCA TCGTCTATTT CTCGGTGCAG GGCTTCAGCC TCTTCCTGCA CGCCGTGCTG
ATCGTCCTGT TCATTGCGCT CACGGCGCCC ATCACCACCA TCTTCCTGAT GCGCGCGGCG
CTCTTCCGCG AACGGCAAAA GGGCGGCGAC GTGCCGCCGG CGGCCAAGCC GGGCTGA
 
Protein sequence
MTDFIVGPLP LWAEIVTAVF AVLGAAFAAI GSFGLVRLPT FFRRIHAPTL GATVGVWCMT 
IATIVYFSVQ GFSLFLHAVL IVLFIALTAP ITTIFLMRAA LFRERQKGGD VPPAAKPG