| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1592 |
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| Symbol | |
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| ID | 7974821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1721132 |
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| End bp | 1722331 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644792192 |
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| Product | transcriptional regulator, Fis family |
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| Protein accession | YP_002943509 |
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| Protein GI | 239814599 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC TTGCGGCCCC GGCAAGTCTG AAAAAACCGC CCCACCCGAG CGAACCGATC
CCGATGTCCG CCTCCCTCGT TGCGCCCCTG CCCGAACGCT CCGCCGCCAT TGCGCAGGCC
CGCCGGGAGC TGATCCACGG CGAAGCCCCC CGCTCGCGCA GTGCGGTGCG CATCGAGCCA
TGGATCCTGC GTTCCTGGGA GCGCTGCCTG GCGGCGGGGC GGCAGCCGCA GCAGCGGATC
AGCTTCGAGC CGGTGGCCAG GTCGGCCGAG CGCGAGGCGG CCGAGCGCAA CCGCGCGCTG
GTGTCGGCGG CCCGGCCGGT GATCGAGCGG CTGTCGCGCG CCATTGCCGA CACGCGCTAT
TTCGCCGTGC TGACCGATGC CGAGGGCATC GTGGTCGACG TGGGCCCGCT GCCCGACGGC
ACCGAGGCCG ACAGCCGCTA CGCCCGCAAC ATCGCCCGCG TGGGCGTCGA CCTGTCGGAG
CGCGCGGTCG GCACCAGTGC GATCAGCACC GCGCTGGCCG AGCAGGAGTC GGTGTGGCTG
CACCGCGGCG AGCACTTCTT CGAGGACACC AGCATCTACA GCTGCGCCGG GGCGCCGCTC
TTCGGCCCGC GGGGCGACTG CATCGGCATG CTCGACCTGA CCGGCGTGCA GGCGGTGGAA
CGGCCGGAGC TGCGGCACCT GGCCACGCTG TCGGCGCGCA GCATCGAGAA CATGCTGGTG
CTGAACCAGC CCTGCGAGCT GCGGCTGCAC CTCTCGTGGC CGGGCTGCCC GCGCGGCGAA
GCCACCGACG GGCTGCTGTG CATCGATGCC GACGGCACGG TGGCGGGTGC CAATGCCGCG
GCGCGCCAGA TGCTGCACGA GCCGCTGGCG CGCAGCCCGC ATGCGCTGCA CTGCAACGAC
CTGTTCGCCA TGCCGCTGGA CATGCTGTTC GATGCGGCCC GCCGCGGCGA CGCCGTGCTC
GAGGTGCCGC TGTGGTCCGG CCTGCGCGTG CAGGTCCGGC CCCAGCGCGG CGGCAAGGGC
TCGGCCGTTG TGGTGCCCGA AGCCCGGCCG CGGCTGCGCG ACGTGGAAGC CGCGCTGATC
CGCAAGGCCG TGGCCGACGC CCGCGGCAAC GTGGCCGAAG CCGCACGCAC GCTGGGCATC
AGCCGCGCCA CGGTCTACCG CAAGCTCTGG CGCGGCCGCG CTTCCGGCTC CGCGGACTGA
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| Protein sequence | MKQLAAPASL KKPPHPSEPI PMSASLVAPL PERSAAIAQA RRELIHGEAP RSRSAVRIEP
WILRSWERCL AAGRQPQQRI SFEPVARSAE REAAERNRAL VSAARPVIER LSRAIADTRY
FAVLTDAEGI VVDVGPLPDG TEADSRYARN IARVGVDLSE RAVGTSAIST ALAEQESVWL
HRGEHFFEDT SIYSCAGAPL FGPRGDCIGM LDLTGVQAVE RPELRHLATL SARSIENMLV
LNQPCELRLH LSWPGCPRGE ATDGLLCIDA DGTVAGANAA ARQMLHEPLA RSPHALHCND
LFAMPLDMLF DAARRGDAVL EVPLWSGLRV QVRPQRGGKG SAVVVPEARP RLRDVEAALI
RKAVADARGN VAEAARTLGI SRATVYRKLW RGRASGSAD
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