| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1525 |
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| Symbol | |
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| ID | 7973124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1643708 |
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| End bp | 1644166 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644792124 |
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| Product | TadE family protein |
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| Protein accession | YP_002943442 |
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| Protein GI | 239814532 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA AGCAGAACGG GGTGGCGTTG ATCGAGTTTG CCCTGATCCT TCCATTGCTG
CTCATCCTGA CGTTCATCAC GACAGAATTC GGGCGGGCGC TGTATCAGTA CAACACCATC
GCGAAATCGC TGCGCGACGC CTCCCGCTAC CTGTCCACCC AGGACCCATC GATCGCAAGC
ACGGATCCTG CCAAGATCAC GACCGCCAAA AACCTGGTGG TCTTCGGCAA CCCGGCCGGC
GCCGGCTCGC CATTGGTCCT GGGCCTCAGC ACTTCTCAGG TTCCCACCCC AACCTGGCAG
TTCAAGGGCA GCGCCCCGGC CATCAATACC GTGACCATCA AGGTCACGGG ATACAAGTTC
CGCCCGCTCA TCACCGGGGT GTTCGGGCTC ACCTTCGGCG ATGTGAACGG AGACATCCCG
TTCGGGGATA TCAGCGCCAC CATGCGAGGT CAATCATGA
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| Protein sequence | MKKKQNGVAL IEFALILPLL LILTFITTEF GRALYQYNTI AKSLRDASRY LSTQDPSIAS
TDPAKITTAK NLVVFGNPAG AGSPLVLGLS TSQVPTPTWQ FKGSAPAINT VTIKVTGYKF
RPLITGVFGL TFGDVNGDIP FGDISATMRG QS
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