| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1486 |
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| Symbol | |
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| ID | 7973084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1606823 |
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| End bp | 1607830 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792084 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_002943403 |
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| Protein GI | 239814493 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.301824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATG AACGCACGTC GCTGCCCCGC TTCGCGGCCG TTGGCGCGGG CCGCATGGGG
CGCGGCATCG CAATTGCCTT CGCCTACGCG GGCCATCGCA TCTCGCTGGT CGACCTGCGC
CAGCGCAGCG ACGAGGCCTG GCAGCGGCTG CAGGCCGAAG CGAAGGCCGA GATCGAAGCC
AGCCTTGCAG GCCTGGCGCA GCTCGGCGTG ATCGACGCGG CGCAGGTCCA GCCGATTGCC
GGCCGGGTGA ATTTCGTGAG CGCCGCCGAT GCGCCGCAAG CGCTGGCCGC CGCCGAGCTG
GTGTTCGAGG GCGTGCCCGA AACCATGGAG GCCAAGCGCG AGGCCTTCGA GCAGCTCAAC
CGCCATTGCA GGGACGACGC CATCCTCACG TCCACCACCA GCAGCATCCT CGTGACGCAG
CTCGCGGCGC TGGTGCGGCT GCCGGGGCGC TTCCTGAACA TGCACTGGCT CAACCCGGCC
TATGTGATTC CCGTGGTGGA GCTCAGCTGC CATCCCGGCA CCGATGCCGC CGTGCTCGCG
CGCACCAAGG CGCTGATGGA GGCCATCGGC AAGCTGCCCG TGGTCTGCGG CGCGTCGCCC
GGCTACATCG TGCCGCGCCT GCAGGCGCTG GTGATGAACG AGGCGGCCCG CATGATCGAG
GAGGGCGCCG CCACCGCCGA GGAGATCGAC AAGGCCACGC GCTACGGCCT CGGGCTGCGC
TTTGCCGCGC TCGGCGTGGT CGAGTTCATC GACTTCGGCG GCTGCGACAT CCTGCACCAC
GCGAGCCGCG AGATGTCGGC CTCGATCGAC AAGGGGCGCT ACACCGCGCC GGCCATCGTC
GATCGCATGG TGGAGGAAGG GCGGCTGGGC CTCAAGAGCG GCAGCGGCTT CTACGACTAC
CAGGGCCGCG ACATCGCCAC CTACCGGCGC GACGTGCTGT CGCGCACGCT CGGCGAGTTG
AAGCACGCGG GCCTGTGGCG CGCGCCGGCC GGCGAGACGC TCTCATGA
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| Protein sequence | MANERTSLPR FAAVGAGRMG RGIAIAFAYA GHRISLVDLR QRSDEAWQRL QAEAKAEIEA
SLAGLAQLGV IDAAQVQPIA GRVNFVSAAD APQALAAAEL VFEGVPETME AKREAFEQLN
RHCRDDAILT STTSSILVTQ LAALVRLPGR FLNMHWLNPA YVIPVVELSC HPGTDAAVLA
RTKALMEAIG KLPVVCGASP GYIVPRLQAL VMNEAARMIE EGAATAEEID KATRYGLGLR
FAALGVVEFI DFGGCDILHH ASREMSASID KGRYTAPAIV DRMVEEGRLG LKSGSGFYDY
QGRDIATYRR DVLSRTLGEL KHAGLWRAPA GETLS
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