| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1454 |
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| Symbol | rpsT |
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| ID | 7971282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1578833 |
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| End bp | 1579147 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792052 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_002943371 |
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| Protein GI | 239814461 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATCCG CCAAGCCCAA GAAAAAGAAC CCGCGCCTCG CCTCCGGCCG TAAGCGCGTC
CGCCAGGACA CCAAGCTCAA CGCTGCGAAC ACCTCGCTGC GCTCCAAATA CCGCACCGCC
GTGAAGAATG TCGAAAAGGC CGTCCTGGCC GGCGACAAGA CCAAGGCAAG CGAACTCTTC
GCGAAGGCCC AGAGCATCGT CGACACCGTC GCCGACAAGG GCATCTTCCA CAAGAACAAG
GCAGCTCGCG ACAAGAGCCG CCTGTCGGCG AAGGTCAAGG CCCTCGCCCT CGCGCCTGAA
AAGGCCGCCG CCTGA
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| Protein sequence | MASAKPKKKN PRLASGRKRV RQDTKLNAAN TSLRSKYRTA VKNVEKAVLA GDKTKASELF
AKAQSIVDTV ADKGIFHKNK AARDKSRLSA KVKALALAPE KAAA
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